Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01010 ATGGACTTGAATTCGAGCCATGTTTCTCCTGTTCTTACGGATTCTGTACCTGTGAACAAATCAAGACTAGGAATCCATTCTAGTCTGCTAACATATTCCCAGCAAGATTCATCTTCGCCAGCACCCGCCCCGGCCGGGAAGCTGCCGAGAACGGGTTCAAGAAAGAGTGCTGCAGGGAGCATTGATGATGTTCGGTTCAATGGGTGGTTGGACGCCATGAAGGCATCTTCCCCTCCCAGGAAGAAGCTTCTTAAAGGATCCATGATTAATGCTCTGCTTCCTTCCAATATTGAATATGACAACGAAGACTACCATATATTGACGGTTGATTACCCTTCTGCACTAGAATGTTTTGAGAAAATCATAGAGCGTGCCAAGAATAACAAGGTTGCAGTGTTTCTAGATTACGATGGCACTCTTTCTCCAATTGTAGATGACCCTGACTGTGCCTTTATGTCCGAACCTATGCGTGAGACTGTGAGGAGTGTGGCAAGGTGTTTCCCCACAGCAATTATCAGTGGAAGAAGTCGTGACCAGGTGTATGATTTGGTTAAACTAACAGAACTGTACTATGCGGGTAGTCATGGAATGGACATAATTGGGCCTTTTCGCCATAATGTGTCCAATAAACTTCCAAATTGTGTCAATTCTACTGACCATCAGGGAAATCAGATAACTCTCTTTCAACCTGCTACACAATTCCTCCCTATCATTGACGAGGTTTTTAGAACCCTCGTTGAGATTACTAAAGATATAAGCGGTGCAAAAGTTGAAAACCACAAGTTTTGTGTTTCTGTACATTACCGTAACGTACAAGAGAATAATTGGACAATTATAGGACAACGTGTCCATGATATCTTGAAAAATTTCCCTGGTTTGCGTTCAACTCATGGACGGAAGGTTTTAGAGGTTCGTCCAGTGATTGACTGGAATAAAGGGAAAGCGGTTGAATTTTTAATGGAATCTCTTGAATTAAATGATAATGATGACGTACTTCCTATCTACATTGGAGATGATAAAACAGATGAAGATGCTTTCAAGATTCTGCGTGAAAGCAATCGAGGTTGTGGGATTTTGGTGTCTTCAGTGAAGAAAGAAAGTAGTGCCTCATATTCTTTAAGAGACCCCAATGAGGTCATGGAATTTCTTCAACTCCTGGTTAGATGGAAAGAGAGAGAAGAAACCAACCATTTCAACAAGCAAATTAAAGTCAAAGTATAG 1221 0.4161 MDLNSSHVSPVLTDSVPVNKSRLGIHSSLLTYSQQDSSSPAPAPAGKLPRTGSRKSAAGSIDDVRFNGWLDAMKASSPPRKKLLKGSMINALLPSNIEYDNEDYHILTVDYPSALECFEKIIERAKNNKVAVFLDYDGTLSPIVDDPDCAFMSEPMRETVRSVARCFPTAIISGRSRDQVYDLVKLTELYYAGSHGMDIIGPFRHNVSNKLPNCVNSTDHQGNQITLFQPATQFLPIIDEVFRTLVEITKDISGAKVENHKFCVSVHYRNVQENNWTIIGQRVHDILKNFPGLRSTHGRKVLEVRPVIDWNKGKAVEFLMESLELNDNDDVLPIYIGDDKTDEDAFKILRESNRGCGILVSSVKKESSASYSLRDPNEVMEFLQLLVRWKEREETNHFNKQIKVKV 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01010 406 MobiDBLite consensus disorder prediction 32 58 - -
Aip05g01010 406 CDD HAD_TPP 131 381 - -
Aip05g01010 406 TIGRFAM T6PP: trehalose-phosphatase 128 388 IPR003337 GO:0003824|GO:0005992
Aip05g01010 406 Gene3D - 130 218 IPR023214 -
Aip05g01010 406 Gene3D - 239 402 IPR023214 -
Aip05g01010 406 SUPERFAMILY HAD-like 131 389 IPR036412 -
Aip05g01010 406 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 132 350 IPR006379 -
Aip05g01010 406 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 1 396 IPR044651 GO:0004805|GO:0005992
Aip05g01010 406 Pfam Trehalose-phosphatase 133 376 IPR003337 GO:0003824|GO:0005992
Aip05g01010 406 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE F-RELATED 1 396 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01010 Aip-Chr5 14467115 14469264 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g01010 126 386 Trehalose Biosynthesis Gene Families AT1G70290 25.090 8.53e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01010 K01087 - tcc:18606311 501.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g01010 05 14467115 14469264 Aip05g01010 05 14467115 14469264 ECH