Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g01008 ATGTCCATAAACGAGGATGATGCGAAGAATGATTCTGATAATGATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGACGCTGAAGACGAGGATGTGGATTCACTGGATTCTACTAGCAAGAGTGAAGAAGACGACGTCGTTAGGGATAACCAAGGTAGAATCATTAGTAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGGAATATGAGGTATCTTGATCTGGATGATAGATCAAGGGAGGCAAGGTCACTAACGCGAACCAAGTGTCCAGCTCGGCTTAGGGTAAAGCTTGACTATGGCTGCGGTAGATGGAAGGTATCATGTTTTGTGGAATCTCACAACCACGATTTGACGCCACCCCAATTTGCGCATCTGGTTCCGGCCAATCGTCGTCTCACTGTCACTGATAAGGTCCAAGTGGAAAATCTTCATAATTTTGGTGTCAAGACCTGCCATATTATGGGGTATATTGCATTCCAGAAGGGTGGATATCGTCATGCTGGCTTCACACGCAAAGATTTGTACAACCACATTGATCGTTATCGTCGGTCAAAGGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGTTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTCGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAATAATAAATACAACAAGCCTTTGGTAATTTTCTCCGGATGCAATCATCACGGGCAGACTGTTATCTTCGGCTCCGGCCTATTATCCGACGAAACCACAGAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGCTGGGAAAAGTCCTAAAGCAGTAATAACTGACGGAGACCTTACCATGCGAGATGCAATCAAGAATGTTCTTCCTGATGCGACCCATCGGTTATGCAGATGGCATCTGCAGAGAAATGCATGCGAAAATATAAAGAATCCTAATTTCCTGCGCGATTTTAAGGATCTTATATACGACAACTACGACCACAGAGACTTTGATTGGAGATGGGCAGCCATTTTGGATAAGCACAACCTTGTTGGGAGTACCTGGATGGAAAAGACGTACGAAACTCATTCGATGTGGTCTCATTGTTTCCTCCGGGATAAGTTTTTCGGTTACATAAGGACGACATCACAATGCAAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACGAATTAATCGCTGACTTTAAGTCTCAGTGCTCAGAACCAGTGATGATTACCTCGTTGGAGGTATATAAAAGATCTGTATCATGTTATTTCACTCGAAATATTTTTAAGGAAATTTGTAATGAGATTCAGAGGGCAAGGGCTTTGAATATCAAGGTACTAAGCACAACATTGGACAAGGTCGAGTTCAGTGTGACTGCTTTCGGAGACCCGGCCAAAGATCGATGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATGTCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCCAGATTCGTTGATCTACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACACAAATGCCTGTGAATGATGACGTCGAAAGGGTCTTAAAGTTTCGAGTTGGTGCATTGGCATCGAATTGCAACAAGCTGTGTGATATTGCTTGCAAGGATGTTGCATACTTTGATGAAGTCCAATCTGAACTTGTCAACTTAATTATCCGCCTGCAGTCACGCAAACAAGGCAACTCAACGCCTAATGTTAACGTAGAAGGAATCAACGATCCCTTTGTTGTGAAAAGCAAATGA 1974 0.4255 MSINEDDAKNDSDNDLGDDFDYQPNAEDDAEDEDVDSLDSTSKSEEDDVVRDNQGRIISRQLVCNKEGWRNMRYLDLDDRSREARSLTRTKCPARLRVKLDYGCGRWKVSCFVESHNHDLTPPQFAHLVPANRRLTVTDKVQVENLHNFGVKTCHIMGYIAFQKGGYRHAGFTRKDLYNHIDRYRRSKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKNNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTETYKWLLETFVEAMAGKSPKAVITDGDLTMRDAIKNVLPDATHRLCRWHLQRNACENIKNPNFLRDFKDLIYDNYDHRDFDWRWAAILDKHNLVGSTWMEKTYETHSMWSHCFLRDKFFGYIRTTSQCKGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNELIADFKSQCSEPVMITSLEVYKRSVSCYFTRNIFKEICNEIQRARALNIKVLSTTLDKVEFSVTAFGDPAKDRWVEVDRGKNLFSCSCKLFESRGIPCSHVFCAMKFENILEFPDSLIYKRWTKNAKNEFISTQMPVNDDVERVLKFRVGALASNCNKLCDIACKDVAYFDEVQSELVNLIIRLQSRKQGNSTPNVNVEGINDPFVVKSK 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g01008 657 ProSiteProfiles Zinc finger SWIM-type profile. 520 556 IPR007527 GO:0008270
Aip05g01008 657 Pfam MULE transposase domain 243 337 IPR018289 -
Aip05g01008 657 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 65 624 IPR031052 GO:0006355
Aip05g01008 657 MobiDBLite consensus disorder prediction 1 52 - -
Aip05g01008 657 MobiDBLite consensus disorder prediction 11 41 - -
Aip05g01008 657 Pfam FAR1 DNA-binding domain 52 121 IPR004330 -
Aip05g01008 657 PANTHER OS02G0262500 PROTEIN 65 624 - -
Aip05g01008 657 SMART 26again6 531 558 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g01008 Aip-Chr5 14363847 14365948 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g01008 MULE 1.4e-27 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g01008 - - ahf:112755379 1232.62