Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00991 ATGTTGTTTTCCCTGGCAAGTGGCAACCCTCCCCGCCGACTATCAGCACTGNNNNNNNNNNNNNNNNNNNNNNNNNGCAGTGGCTTGTTCCAAGGTGTTGCGTGCAATGAGCACCGCAAAGTGGCCAACATTTCCTTGCAGGGAAAGGGACTTTCAGGGTGGTTATCTCCTTCTGTGGCTGAACTTAAATGCTTGTCAGGTTTATACCTTCATTACAACAACCTTTCTGGTGAGATACCCCCACAAATTTCAAATCTTACTGAACTTGTTGATCTCTATCTCGACGTGAATAGTCTCTCCGGAACCATACCTACTGAGATCGGCAACATGGCTAGTCTCCAAGTGGTGCAGTTAGGAGACAACCAATTAGTGGGAAGTATACCTAAACAGATTGGCTCCTTGAAGCAGCTTAGTACTCTTGCATTGCAATATAACAAATTAAGTGGCGAAATTCCACTAAGCTTGGGAAACTTGGAAAAGCTAAGCAGGCTGAATTTGAGCTTTAACAACTTCACTGGTATGATTCCTGCAACATTAGCTCATCTTGAGCAACTCAAGGTTCTAGACATTCAAAACAATTCAATATCAGGGTTTGTTCCTTCAGGATTGAAGAGACTGGGGGATGGATTCCAAGGTGCAAACAACCGAGGTCTATGTGGAGTTGGGTTTTCTACTCTGAGAGCTTGCAACAAAGATCAAGACATGAAAGTTAACCATATTGATGACTCAGACCAAGATCTACCCAAAAATGATGATACTGAAAACGCTCTTCCAGAGCCTGCAAATGTGAAATTGAATTGTAACCAGACTCATTGCTCAAAATCAAGGAGGTTTCCTCAGGCTGTGATCACAGCAGGTCTTGTGACAATCACACTCACATTCTTCAGCGTTGGATTTCTTACTTTTGTCAAATACCGACGGCAAAAGCAGAGGATTAGGAATACATCAGACTCATCTGAAGGGAAACTTAGTCCTTGCCAGCCTAAAGACTTCATCAGGAAAAGTCCATCTCCACTTGTTAACCTTGAGTACCACAATGGGTGGGATCCATTGTCTAACCAAAATCTAAACCAGGTTAGATTTAATGTGGATGAGGTAGAGTCGGCAACGCTGTACTTTTCGGAAGCCAATTTATTGAGTAAGAGCAAATTCTCAGCAGTTTATAAGGGAGTACTCAGAGATGGTTCTCTTGTGGCCATTAGAAGCATTAACTCGACATGCTGCAAAACTGAGGAAGCTGAGTTTGTGAAGGGGCTGACCTTAGTAACCTCACTGAGACATGAAAACCTTGTTAGGCTCAGAGGTTTCTGCTGTTCAAGAAGTAGAGGTGAATGTTTCCTGATCTATGACTTTGCCACCAAGGGAAACCTGTCTCAATATCTTGATATGGAAGATGGAAATGGACATGTGCTTGAATGGTCCAAGAGGGTCTCCATCATCAAGGGCATTGCAAAGGGTATTGGATATTTGCACGGTGATGAAGCAAGCAAACCTTCACTAGTACATCAGAATATTTCAGTTGAAAATGTTCTCCTTGACCAGCAGTTCAATCCGTTGATCATGGATGCTGGGCTCCCCAAGCTTCTTGCAGATGACGTTGTTTTCTCAGCTCTGAAAGTAAGTGCCGCCATGGGGTACCTGGCCCCTGAATACGTTACTACAGGACGCTTCACTGAGAAGAGTGACATCTATGCATTTGGTGTCATTGTTCTTCAAGTTCTGTCTGGGAAGAAAACTGTAGGTGGTTCGATACGGTTGGCAGTTGAGTCTCTAAGATTTGATGATTTTGTTGACAGAAATCTGAGGGGAAGATACTCCAAACATGAAGCAACAATGCTTTCAAAGCTTGCAACTCTCTGCACCCATGAGCTTCCTGACCAAAGGCCAACCATGGTGGATGTGATTCAAGAGCTGAATGTGTTTCCTGCTAATTCATGA 1938 0.4309 MLFSLASGNPPRRLSALXXXXXXXXXSGLFQGVACNEHRKVANISLQGKGLSGWLSPSVAELKCLSGLYLHYNNLSGEIPPQISNLTELVDLYLDVNSLSGTIPTEIGNMASLQVVQLGDNQLVGSIPKQIGSLKQLSTLALQYNKLSGEIPLSLGNLEKLSRLNLSFNNFTGMIPATLAHLEQLKVLDIQNNSISGFVPSGLKRLGDGFQGANNRGLCGVGFSTLRACNKDQDMKVNHIDDSDQDLPKNDDTENALPEPANVKLNCNQTHCSKSRRFPQAVITAGLVTITLTFFSVGFLTFVKYRRQKQRIRNTSDSSEGKLSPCQPKDFIRKSPSPLVNLEYHNGWDPLSNQNLNQVRFNVDEVESATLYFSEANLLSKSKFSAVYKGVLRDGSLVAIRSINSTCCKTEEAEFVKGLTLVTSLRHENLVRLRGFCCSRSRGECFLIYDFATKGNLSQYLDMEDGNGHVLEWSKRVSIIKGIAKGIGYLHGDEASKPSLVHQNISVENVLLDQQFNPLIMDAGLPKLLADDVVFSALKVSAAMGYLAPEYVTTGRFTEKSDIYAFGVIVLQVLSGKKTVGGSIRLAVESLRFDDFVDRNLRGRYSKHEATMLSKLATLCTHELPDQRPTMVDVIQELNVFPANS 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00991 645 MobiDBLite consensus disorder prediction 237 253 - -
Aip05g00991 645 Gene3D Phosphorylase Kinase; domain 1 341 451 - -
Aip05g00991 645 SMART LRR_typ_2 182 205 IPR003591 -
Aip05g00991 645 SMART LRR_typ_2 158 181 IPR003591 -
Aip05g00991 645 SMART LRR_typ_2 110 134 IPR003591 -
Aip05g00991 645 SMART LRR_typ_2 62 86 IPR003591 -
Aip05g00991 645 SUPERFAMILY L domain-like 31 204 - -
Aip05g00991 645 Gene3D Ribonuclease Inhibitor 151 215 IPR032675 -
Aip05g00991 645 Gene3D Transferase(Phosphotransferase) domain 1 453 641 - -
Aip05g00991 645 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 27 640 - -
Aip05g00991 645 Pfam Protein tyrosine and serine/threonine kinase 378 638 IPR001245 GO:0004672|GO:0006468
Aip05g00991 645 ProSiteProfiles Protein kinase domain profile. 373 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00991 645 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 27 640 - -
Aip05g00991 645 Pfam Leucine rich repeat 160 205 IPR001611 GO:0005515
Aip05g00991 645 Gene3D Ribonuclease Inhibitor 22 150 IPR032675 -
Aip05g00991 645 SUPERFAMILY Protein kinase-like (PK-like) 348 639 IPR011009 -
Aip05g00991 645 MobiDBLite consensus disorder prediction 237 256 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00991 Aip-Chr5 14068342 14070817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00991 28 486 Miscellaneous Gene Families AT4G22730 57.113 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Aip05g00991 PK_Tyr_Ser-Thr 3.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00991 - - aip:107643018 1063.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00991 05 14068342 14070817 Aip05g00991 05 14068342 14070817 ECH