Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00984 ATGGCGGCGAGCAACACTGCCACAACGCCTTCCGTGGACTCCGCTTCAGCAGAGGAGCTATCAGCGAAAGCCGTTAACAAGCGATACGAAGGGTTGGTCATGGTTAGGACCAAGGCAGTCAAGGGAAAAGGGGCTTGGTACTGGGCGCACCTCGAACCTATGCTGGTTCACAACGCTGACACCGGTCTTCCCAAAGCGGTGAAGCTACGCTGCTCTCTCTGCGACGCCGTTTTCTCAGCTTCCAACCCTTCTCGCACAGCCTCCGAGCACCTCAAGCGTGGGACTTGCCCCAATTTCAATTCCGCTGCCAAACCCATTTCCTCTGTTTCTCCCACCGTCGCTGCCATGGCCTCCTCTCCCTCTCCTACGGCCAACCACAACCACCGCAAGAGGAGTTCCACTTCGTCCGCCGCCGCCACGGGCGGTCCTGCTACGTCGTACCACGTGACGCCGCTGGCGGTGGTGGATCCGTCGCGGTTCTGCGGGGAGATCGCGTACACATCGTCAGGTTCCACGGCGATTACACCGGTGGGTCTGCTGGCGCAGCAGCCGCATTTGATGCTGTCGGGAGGAAAAGACGATTTGGGAGCTCTGGCTATGTTGGAAGACAGCGTGAAGAAGCTCAAGAGTCCAAAAACGTCCCCCGGTCCAACGCTGAGCAAGACGCAGGTGGAGACGGCCTTGGATTTCCTGGCCGATTGGGTATACGAGTGTTGTGGTTCGGTTTCGTTTTCGAGCCTGGAGCAGCCGAAGTTCAGGGCGTTTCTGAACCAGGTTGGTTTGCCGGCGGTTTCTGGGAGGGAGTTGATTGGCGGGAGGTTGGATTCGAAGTTCGAGGAGGCGAAGGCGGAGTCGGAAGCTCGGATGAGAGACGCCATGTTCTTTCAGTTATCGACGGAGGGTTGGAAAGCAAAGAGCAGTGAGGAGAATGGGAATGTGGTGAAGGTGACTGTGAATCTGCCGAATGGGACCAGTTTGTACAGAAGAGCTGTGTTTGTGAGTGGCTCTGCTCCTTCAAAGTACGCAGAGGAGGTTCTGAGGGAGACAATCACTGCCATTTGCGGGAATGTTGTTGACAAGTGTGTTGGCATTGTTGCGGACAGATTCGGCTCCAATGCTCTCAGAAATTTGGAGTCTCAGAATCATTGGATGGTTAATCTCTCTTGTCAGTACCAAGCTTTCTCCTCTCTAATCAAGCATCTCACCAAGGAACTTCCCTTCTTTCCCACCGTCACTCGCAACTCTTTTAAGATCGCCTCCTTTCTCAATTACAACTCTCCCCATCTCAGGAATGCTTTCCACAAGTACCAATTGCAGGAGTACGGCCACGCCTCCATGCTGCGAATGCCGCCTCCCCCGCCCGACTCTCATCATGCTTTCTTCACCTTTGGCCCTCTCTTTGACGTCATGGACGACACGCTGGCTTCTGCCCGTGCCTTGCAGCTTCTCCTGCACGATGAACACTTCAAGATTCTCTCCATTGAAGACCCAAGCGCCAGGGAGGTCGGGGATATAATCGGAGACGTTGGATTCTGGAACGACTTGAACGCTGTTCACTCGCTCGTGAAACTGGTCAGGGACATAGCTCAGGAAATTGAGTCAGAGAGGCCGCTTGTTGGTCAATGCCTTCCCTTGTGGGAAGAGGTGAGAGCCCAAGTGAAAGAATGGTGTTCTAAGTTCCACATGGCAGACGGAGCGGTGGAGAAGGTCATAGAGAGACGCTTCAAGAAGAACTACCACCCTGCTTGGGCTGCCGCCTACATCCTGGACCCGCAGTATCTTGTGAGAGACACCTGCGGCAAGTACCTGCCGCCGTTCAAGTGCTTGACAGCGGAGCAGGAGAAGGACGTGGACAAGCTCATAACAAGGCTTGTTTCGAGGGAGGAGGAGCACATTGCTCTGATGGAGCTCATGAAGTGGAGAACGGAAGGGCTTGATCCCGTGTATGCACGCGCCGTGCAGATGAAGGAGAGGGATCCCGTTACCGGCAAGATGAGAATTGCCAACCCGCAGAGCAGTAGGCTCGTTTGGGAATCATATCTGACCGAGTTCAAGTCCTTGGGGAGGGTTGCTGTTAGGCTCATTTTTCTTCATGCAACTTCTTCTTGTGGCTTCAAATTGAACTGGAATGTGTGGAGATGGGTTTCTAGGGGACAAAGACACTCCACCACCGCACTCGAAAGGGTGCAGAAATTAATATTCATTGCTGCTCATTCCAAATTGGAGAGGAGAGATTTTTCCACTGATGAACATAAGGACGCAGAGCTTCTTGATTTCCCAAATTCTGACGATGATGTCTTGAACGACGTTCTTGTCGATACATCTTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTGGTTAGGGAAGGGGAAGGAGAGCTTGATTAA 2406 0.5258 MAASNTATTPSVDSASAEELSAKAVNKRYEGLVMVRTKAVKGKGAWYWAHLEPMLVHNADTGLPKAVKLRCSLCDAVFSASNPSRTASEHLKRGTCPNFNSAAKPISSVSPTVAAMASSPSPTANHNHRKRSSTSSAAATGGPATSYHVTPLAVVDPSRFCGEIAYTSSGSTAITPVGLLAQQPHLMLSGGKDDLGALAMLEDSVKKLKSPKTSPGPTLSKTQVETALDFLADWVYECCGSVSFSSLEQPKFRAFLNQVGLPAVSGRELIGGRLDSKFEEAKAESEARMRDAMFFQLSTEGWKAKSSEENGNVVKVTVNLPNGTSLYRRAVFVSGSAPSKYAEEVLRETITAICGNVVDKCVGIVADRFGSNALRNLESQNHWMVNLSCQYQAFSSLIKHLTKELPFFPTVTRNSFKIASFLNYNSPHLRNAFHKYQLQEYGHASMLRMPPPPPDSHHAFFTFGPLFDVMDDTLASARALQLLLHDEHFKILSIEDPSAREVGDIIGDVGFWNDLNAVHSLVKLVRDIAQEIESERPLVGQCLPLWEEVRAQVKEWCSKFHMADGAVEKVIERRFKKNYHPAWAAAYILDPQYLVRDTCGKYLPPFKCLTAEQEKDVDKLITRLVSREEEHIALMELMKWRTEGLDPVYARAVQMKERDPVTGKMRIANPQSSRLVWESYLTEFKSLGRVAVRLIFLHATSSCGFKLNWNVWRWVSRGQRHSTTALERVQKLIFIAAHSKLERRDFSTDEHKDAELLDFPNSDDDVLNDVLVDTSXXXXXXXXXXXXXFFFLVREGEGELD 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00984 801 SUPERFAMILY Ribonuclease H-like 309 627 IPR012337 -
Aip05g00984 801 PANTHER F16P17.2 PROTEIN 12 774 - -
Aip05g00984 801 MobiDBLite consensus disorder prediction 113 142 - -
Aip05g00984 801 PANTHER OSJNBA0013A04.12 PROTEIN 12 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00984 Aip-Chr5 13941248 13943653 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00984 - - pmum:103337272 1113.21
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00984 05 13941248 13943653 Aip05g00984 05 13941248 13943653 ECH
Aip05g03701 05 144997387 144998689 Aip05g00984 05 13941248 13943653 ECH
Aip03g03871 03 121298487 121304125 Aip05g00984 05 13941248 13943653 PCT