Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00978 ATGGAGGGTAGAGACGTGGTTAGCAGTGGTGGGGTTACGGTGGTGGGATCCGATGGTCCGTCGGACTACCATGCTGCTCCCAGGAACGACAATCCAGCTCCGGCTGGTGGATCCGCCATGGCCATGTCGGGAACGCAGGTGGGTGCTCCGCTGCAGTCGGCGGTTGCAGCAGTGTCGGAGAAGAAGAAGAGGGGTCGACCCAGGAAGTACGCAGCAGACGGGTCGTCGGTTACTATGGCGATGTCTCCGAAGCCGATTTCTTCTTCGGGTCTACCGGCGGTGATCGATTTCTCTTCGGGAAAGCGCGGGAAAGTGCGGCCACCTGGCTCCGTCAATAAAGCCAAGTTCGAGGTTGAGAATATAGGCGAGTGGGTTGGATGCTCGTCAATCGGTGCTAATTTTACCCCCCATATCATCACTGCTAATTCCGGGGAGGATGTTACCATGAAGATAATATCGTTTTCTCAGCAAGGACCACGAGCTATATGTATTGTGACACTTCGTCAACCTGATTCTTCCGGAGGTACACTGACATACGAGGGACGGTTTCAAATTCTGTCTTTGAGCGGATTATTCATGCCAAATGATAATGGTGGAACACGGAGCAGATCCGGTGGCATGAGTATTTCCTTAGCAAGTCCGGATGGACGTGTTGTAGGCGGCGGAGTAGTTGGTCTATTGGTTGCTGCAAGTCCTGAGCAGGTAGCTACTATGCACTCCCATTAG 726 0.5344 MEGRDVVSSGGVTVVGSDGPSDYHAAPRNDNPAPAGGSAMAMSGTQVGAPLQSAVAAVSEKKKRGRPRKYAADGSSVTMAMSPKPISSSGLPAVIDFSSGKRGKVRPPGSVNKAKFEVENIGEWVGCSSIGANFTPHIITANSGEDVTMKIISFSQQGPRAICIVTLRQPDSSGGTLTYEGRFQILSLSGLFMPNDNGGTRSRSGGMSISLASPDGRVVGGGVVGLLVAASPEQVATMHSH 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00978 241 MobiDBLite consensus disorder prediction 59 83 - -
Aip05g00978 241 Gene3D - 136 240 - -
Aip05g00978 241 ProSiteProfiles PPC domain profile profile. 131 241 IPR005175 -
Aip05g00978 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 8 236 IPR039605 GO:0003680
Aip05g00978 241 MobiDBLite consensus disorder prediction 1 43 - -
Aip05g00978 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 136 235 IPR005175 -
Aip05g00978 241 CDD DUF296 135 220 IPR005175 -
Aip05g00978 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 8 236 - -
Aip05g00978 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 133 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00978 Aip-Chr5 13810838 13844714 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00978 10 235 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 58.712 1.10e-89 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00978 - - jre:108981856 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00978 05 13810838 13844714 Aip05g00978 05 13810838 13844714 ECH
Aip05g03706 05 145038344 145042723 Aip05g00978 05 13810838 13844714 ECH