Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00975 ATGGAGGTTGCAGACGGTTGCGACATCGTTGAGAGCGTCTCAAACTTCGCAAGGAGGCGCCAAAGAGGGGTTTGCATCATGAGCGGCACCGGCACCGTCACCAACGTCACACTCCGACAACCAGCTTCCTCTGGAGCCGTCGTCTCCCTCCATGGAAGGTTCGAGATCTTGTCCCTGGCGGGATCCTTCCTCCCTCCTCCTGCTCCACCTGCGGCCTCCGGCTTGACCATATATCTAGCCGGAGGGCAAGGGCAGGTGGTCGGAGGGAGTGTGGTGGGGACACTAATTGCTTCCGGCCCGGTGGTCATCATGTCCGCTTCCTTCAGCAACGCTGCGTATGAGAGACTTCCTTTGGAGGAAGAGGACCCTTCCATGCCCTTGCAAGGTTCTGGCGGTGGCGGCGGCGGCTCAATCGGGTCCCCCGGTGGTGGTCAGCAGCATGCGCAGCAGCAGCAACAGCAGCAGATGTTAGGAGACGCAACTGCTCCACTCTTCCATGGTTTGAATCCGAATCTTCTGAATTCAGTTCAGATGCCAACGGAAGCTTTCTGGAATACTCCTGGTCGCTCTCCTTATTGA 579 0.582 MEVADGCDIVESVSNFARRRQRGVCIMSGTGTVTNVTLRQPASSGAVVSLHGRFEILSLAGSFLPPPAPPAASGLTIYLAGGQGQVVGGSVVGTLIASGPVVIMSASFSNAAYERLPLEEEDPSMPLQGSGGGGGGSIGSPGGGQQHAQQQQQQQMLGDATAPLFHGLNPNLLNSVQMPTEAFWNTPGRSPY 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00975 192 MobiDBLite consensus disorder prediction 142 159 - -
Aip05g00975 192 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 1 192 - -
Aip05g00975 192 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 123 - -
Aip05g00975 192 PIRSF ESCAROLA 1 191 IPR014476 GO:0003680
Aip05g00975 192 Gene3D - 1 124 - -
Aip05g00975 192 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 110 IPR005175 -
Aip05g00975 192 MobiDBLite consensus disorder prediction 121 163 - -
Aip05g00975 192 CDD DUF296 2 64 IPR005175 -
Aip05g00975 192 ProSiteProfiles PPC domain profile profile. 1 130 IPR005175 -
Aip05g00975 192 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 192 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00975 Aip-Chr5 13677577 13678155 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00975 1 187 AT-hook Motif Nuclear Localized (AHL) Family AT2G45430 67.010 2.05e-57 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00975 - - gmx:100781436 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00975 05 13677577 13678155 Aip05g00975 05 13677577 13678155 ECH