Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00967 ATGAGAAAACACCGCCAAATTAACCTCTTTCATGCTCTGTTATGCTCCATTCTCCTCTTGGTTTCTTGTGTGACGGTATCACCAGCCACTGAGAGAGAGATTCTGCAACAATTTAAGGGCAACATCACAGAGGACCCTTTCAACAGCTTGAGTTCATGGGTTTCCAGTGGAAACCCCTGCCAAGATTACAGAGGTGTTTTCTGCAACGATGAAGGTTCTGTGGAAAGGATCATTCTTTGGAACACTAGCTTGGCTGGGGTGTTGTCTCCAGCATTGTCTGGTTTGAAGAGGTTGAGGACATTGACATTGTTTGGGAACCGGTTCAAGGGTAACATCCCAGATGATTATGCTGATCTTCACACATTGTGGAAGATCAATTTGAGCTCCAATGCGTTATCTGGTTCAATCCCAGAGTTCATTGGTGATTTGCCAAACATTCGGTTTCTAGATTTGTCCAAGAATGGCTTCACTGGGGAGATACCTTCAGCCTTGTTCAGGTACTGTTACAAAACCAGGTTTGTGTCTCTTTCTCATAACAACCTTGCTGGTCCAATTCCTGTGTCATTGGAGAATTGCTCCAACCTTGAAGGATTTGATCTTTCTTACAATAATCTGACCGGTGCTGTCCCTTCGCGGCTTTGTGATATTCCGAGCTTGTCATATGTGTCACTGAGAAGCAATGCCTTATCAGGGAGTGTGAAAGGTCTCATATCACCTTGCCGGAGCTTGAAACATTTGGATTTCGGTAGTAATATGTTCACAGATTTGGCTCCATTCAGCATCCTTGAAATGCAAAATCTTACTTATTTCAATATATCCTATAATAGGGACCTTTCTGGTAATAGCTTAGAAGGTGAGATTCCTCAGACCCTATACAACATGACATACTTGGAATCCCTCGACTTACATCAGAACCGGCTCAATGGAAGCATACCACCAAGCCTAGGAAACCTGTCAAGGTTGCAATACCTAGATCTGTCACATAATTCACTATCTAGTTTAATCCCATCTACTCTTGGAAATTTAGGAAACATGACTCATTTTGATCTTTCATTCAACAATCTATCCGGTCTCATTCCTCAAATTGAAACCATACAGCGTTTTGGTCCATCTGCTTTTTCCAATAATCCTTTTCTCTGTGGTGCTCCTTTGGACACCTCTTGCTCGGCGAAGGGAACTCCGTCACCTTCAGCACCTGGGAAGACTAAAGTTCTAAGCATCTCAGCAATTGTTGCGATTGTTGCTGCAGCTCTGATCCTTGCAGGGGTTTGTTTGGTAACCATCATGAATATTAGGGCTCGTCGTCGAAAAAAAGACAGTGATGAGATCATGGTTGTTGAGAGCACACCCCTTGGATCATCAACAGAATCAAATGTTATAATTGGAAAGCTGGTTCTGTTTAGCAAAAGTTTACCATCAAAATATGAAGATTGGGAGGCAGGTACAAAAGCATTGCTTGACAAAGAGTCTATAATAGGTGGCGGATCAATTGGAACAGTGTACAGAACTGATTTTGAAGGCGGCATCTCAATTGCAGTGAAGAAGCTTGAGACTTTGGGAAGGATCCGAAACCAGGAAGAATTCGAACACGAGATTGGACGACTAGGCAACCTCCAACACCCAAATTTGGTTTCTTTACAAGGTTACTATTGGTCCTCTTCAATGCAATTGATACTATCAGAGTTTGTCCCTAATGGGAATCTCTACGATAATCTACATGGGATTGGATATCCAGGAACAAGCACTAGCAGTAGCAACAGGGAGTTATATTGGTCTAGAAGGTTCCAAATTGCACTTGGTACTGCAAGAGCACTAGCCTATCTTCACCACGACTGCAGACCTCCAATTCTTCATCTCAACATTAAATCCTCTAACATACTCTTAGATCACAAGTATGAGGCTAAGTTGTCTGATTATGGTTTAGGAAAGTTGCTCCCCATTTTGGACAATTACGGTCTGACCAAGTTCCACAATGTAGTCGGCTATGTCGCACCAGAGTTGGCTCAAAGCCTAAGGCAGAGTGAGAAGTGTGATGTGTACAGTTTTGGGGTCATTCTTTTGGAGCTGGTTACAGGTAGGAAGCCAGTAGAAAGTCCAACAACAAGTGAGGTGGTCATCTTATGTGAATATGTAAGAAGTTTGTTAGAGGTTGGTTCAGCTTCAAATTGCTTTGACAGAAACTTATTGGGATTTGCTGAGAATGAGTTAATTCAGGTTATGAAGTTGGGACTAATTTGTACCTCGGAGGATCCATTAAGGAGACCAAGCATGGCTGAGGTTGTCCAGGTCCTTGAGTCCATTAGAAATGGATTGGGAGCACACTAA 2325 0.4271 MRKHRQINLFHALLCSILLLVSCVTVSPATEREILQQFKGNITEDPFNSLSSWVSSGNPCQDYRGVFCNDEGSVERIILWNTSLAGVLSPALSGLKRLRTLTLFGNRFKGNIPDDYADLHTLWKINLSSNALSGSIPEFIGDLPNIRFLDLSKNGFTGEIPSALFRYCYKTRFVSLSHNNLAGPIPVSLENCSNLEGFDLSYNNLTGAVPSRLCDIPSLSYVSLRSNALSGSVKGLISPCRSLKHLDFGSNMFTDLAPFSILEMQNLTYFNISYNRDLSGNSLEGEIPQTLYNMTYLESLDLHQNRLNGSIPPSLGNLSRLQYLDLSHNSLSSLIPSTLGNLGNMTHFDLSFNNLSGLIPQIETIQRFGPSAFSNNPFLCGAPLDTSCSAKGTPSPSAPGKTKVLSISAIVAIVAAALILAGVCLVTIMNIRARRRKKDSDEIMVVESTPLGSSTESNVIIGKLVLFSKSLPSKYEDWEAGTKALLDKESIIGGGSIGTVYRTDFEGGISIAVKKLETLGRIRNQEEFEHEIGRLGNLQHPNLVSLQGYYWSSSMQLILSEFVPNGNLYDNLHGIGYPGTSTSSSNRELYWSRRFQIALGTARALAYLHHDCRPPILHLNIKSSNILLDHKYEAKLSDYGLGKLLPILDNYGLTKFHNVVGYVAPELAQSLRQSEKCDVYSFGVILLELVTGRKPVESPTTSEVVILCEYVRSLLEVGSASNCFDRNLLGFAENELIQVMKLGLICTSEDPLRRPSMAEVVQVLESIRNGLGAH 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00967 774 PRINTS Leucine-rich repeat signature 318 331 - -
Aip05g00967 774 PRINTS Leucine-rich repeat signature 297 310 - -
Aip05g00967 774 Gene3D Ribonuclease Inhibitor 277 390 IPR032675 -
Aip05g00967 774 PANTHER UNNAMED PRODUCT 276 770 - -
Aip05g00967 774 PANTHER UNNAMED PRODUCT 9 275 - -
Aip05g00967 774 Pfam Leucine rich repeat 277 331 IPR001611 GO:0005515
Aip05g00967 774 Pfam Leucine rich repeat 174 229 IPR001611 GO:0005515
Aip05g00967 774 Gene3D Ribonuclease Inhibitor 169 276 IPR032675 -
Aip05g00967 774 SUPERFAMILY L domain-like 45 385 - -
Aip05g00967 774 SUPERFAMILY Protein kinase-like (PK-like) 487 765 IPR011009 -
Aip05g00967 774 Gene3D Phosphorylase Kinase; domain 1 454 562 - -
Aip05g00967 774 Gene3D Transferase(Phosphotransferase) domain 1 563 771 - -
Aip05g00967 774 Pfam Protein kinase domain 488 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00967 774 CDD STKc_IRAK 492 767 - -
Aip05g00967 774 Pfam Leucine rich repeat N-terminal domain 29 69 IPR013210 -
Aip05g00967 774 SMART LRR_typ_2 318 341 IPR003591 -
Aip05g00967 774 SMART LRR_typ_2 342 365 IPR003591 -
Aip05g00967 774 SMART LRR_typ_2 294 317 IPR003591 -
Aip05g00967 774 SMART LRR_typ_2 143 167 IPR003591 -
Aip05g00967 774 PANTHER - 276 770 - -
Aip05g00967 774 PANTHER - 9 275 - -
Aip05g00967 774 Gene3D Ribonuclease Inhibitor 28 168 IPR032675 -
Aip05g00967 774 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Aip05g00967 774 ProSiteProfiles Protein kinase domain profile. 486 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00967 774 ProSiteProfiles Leucine-rich repeat profile. 320 341 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00967 Aip-Chr5 13524026 13526663 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00967 5 773 Receptor kinase-like Gene Family AT1G12460 58.161 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-1 Aip05g00967 Pkinase 2.2e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00967 - - gmx:100800970 914.45