Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00962 ATGATGGCTATTAAGTTAGTAGTCTTTGTCCTCAATGTAATCTTGTTTTTTCCCTCATCACTGTCTCAAAGGGTAGCTAGCGAAGAAGGAAATGAGTTTCGAACATACATTGTTCATGTTAAGAAGCCAGAAAGTAGAATATGGTTCCATTCAATAGAAGGCAATAATAACATCAACAATCTCCATAGCTGGTACGAGTCATTCTTGCCATCTTCCACCATTGATACTGCAAGTTTAAATAGCCAGACGCGAATGCTTCATGCATATCGACACGTTGGTTATGCTTTTGCAGCAAGACTTACCAAAGATGAAGCACTACACATGGCCAACAAAGATGGTGTTCTCATGATTCGCGAAGAAAAGATGCTGCAGCTGCAAACAACTCACACCCCTACCTTCTTGGGACTGCACCCAGACGAAGGCCTTTGGAGAGAGACCAACCTTGGGAAAGGTGTGATCATTGGAGTTTTTGACACCGGAATATCGCCTTCTCATCCTTCCTTCAACGACCAAGGAATGTCGCCGCCACCGGCTAAGTGGAAAGGCAAGTGTCACTTTAGAAAAGGCTGCAACAACAAAATAATTGGGGCAATAACCACCGTCGGGTCCACTTATATGTCTGAGGCCGAACCCGTGCCACCTTTCGATGACATCGGGCACGGCACCCACACTGCCAGCATAATTGCTGGCAGTTTTGTGAAAAATGCTAATGTTCTTGGCCATGCCAACGGAACTTCTGTTGGCATGGCTCCTCATGCTCATTTAGCCATTTACAAAGCGTGCAGCATGATTGGTTGCAGTGAAGGTTCTGTTCTAGCCGCATTCGATGCTGCAATTAACGATGGCGTTGACATTATCTCTGTTTCCTTAGCCGGAGACTCTAAATTGTTCTCCGAAGATGCCATGTCGATCGGTAGTTTTGGAGCAACACAGAAGGGGATTCTTGTCACCATTGCAGCCGGTAATGAAGGTCCTGAATCAAGTACGGTTGTGAATGATGCTCCATGGATATTTACCGTAGGAGCAAGCACTATGGATCGACGAATAGTAGCATCAGTCAAGCTTGGAAATGGTGCAGAGTATGATGGTGAGTCTCTTTACGAATCAAAACTATTCAAGAATAATTACAACCCTCTGGTTCATCTTAATGGAGCACCCTGTAACAAAGGTCTATTAGAGAGTATGAAAGTGGAAGGAAAGATCGTGGTGTGTGTTAACGAGAAGAACACAATGAAGTATAAGCAAGCAGAAGCCGTGAAAAGTGCTGGTGGTGCTGCAATGATTCTCGCCAATAGTGATACATGTGGATATACCCTTTCAACTGAAGAAACGTACCCTCTTCCTGTTACACATGTGAGCCATGCTTCAGGGTTGCAAATCATGCGCTACATAGACTCATGCAAGGACCCTAAGGCCACAATATTGTTCAAAGGAACTATCACAGGTAACACATCTGCACCCGTTGTTGCTTCATTCTCATCAAGAGGCCCGAGCAGGCAATGTCCTGGGCTTTTAAAGCCTGACATTATAGGGCCCGGAGTGAATGTTCTAGCTTCTTCGGCCAATTGGAGAACTAGCTACAATGGAAGACCACCAGCTTTCTCAATCATGTCAGGCACATCAATGGCTTGTCCTCACATAAGTGGCGTTGCTGCATTGCTCAAGAGCTCTCACCCTCATTGGTCACCTGCTGTTGTTAAGTCTGCAATCATGACCACGGCATACACAACAAACCTTCAAGGTGATCCCATTCCTGACGAGAAGTTACATCCTGCGAGCTTGTTCGCAATTGGAGCCGGCCATGTCAAGCCTTCCAAGGCCGAAGATCCTGGACTGGTTTATGATATTATGCTTGATGATTACACTGCTTATTTATGTGGATTGGGTTTTACCAGCACAATGGCTCAGCTGGTTACGCATAAGCCTGTGAATTGCGACCTGATAAAAAAGATTGAGGCTACAGAGTTGAACTATCCTTCCTTCTCGGTTGTGTTGGGAGCTGCTGATTATTTCCCTAAGACCTACAACAGAACTGTTATGAATGTTGGTCAAGCTGATTCGCATTATATTGTGGAAGTTGTTCCCCCGGCTGGTGTACATGTTAGCGTGGAACCGCAGATTCTTGTGTTCAACGGCGAGCAACAGACGGCGAGGTACTCGGTGACGTTTACTCGGAAAACAGGAGAAACTATTAGTGCTTCATCTACGGCGCAAGGTTTTATAGAGTGGGTTTCTGATAAGCATTCTGTGAGAAGTCCCATTGCTGTTATTTTCACTTGA 2280 0.4531 MMAIKLVVFVLNVILFFPSSLSQRVASEEGNEFRTYIVHVKKPESRIWFHSIEGNNNINNLHSWYESFLPSSTIDTASLNSQTRMLHAYRHVGYAFAARLTKDEALHMANKDGVLMIREEKMLQLQTTHTPTFLGLHPDEGLWRETNLGKGVIIGVFDTGISPSHPSFNDQGMSPPPAKWKGKCHFRKGCNNKIIGAITTVGSTYMSEAEPVPPFDDIGHGTHTASIIAGSFVKNANVLGHANGTSVGMAPHAHLAIYKACSMIGCSEGSVLAAFDAAINDGVDIISVSLAGDSKLFSEDAMSIGSFGATQKGILVTIAAGNEGPESSTVVNDAPWIFTVGASTMDRRIVASVKLGNGAEYDGESLYESKLFKNNYNPLVHLNGAPCNKGLLESMKVEGKIVVCVNEKNTMKYKQAEAVKSAGGAAMILANSDTCGYTLSTEETYPLPVTHVSHASGLQIMRYIDSCKDPKATILFKGTITGNTSAPVVASFSSRGPSRQCPGLLKPDIIGPGVNVLASSANWRTSYNGRPPAFSIMSGTSMACPHISGVAALLKSSHPHWSPAVVKSAIMTTAYTTNLQGDPIPDEKLHPASLFAIGAGHVKPSKAEDPGLVYDIMLDDYTAYLCGLGFTSTMAQLVTHKPVNCDLIKKIEATELNYPSFSVVLGAADYFPKTYNRTVMNVGQADSHYIVEVVPPAGVHVSVEPQILVFNGEQQTARYSVTFTRKTGETISASSTAQGFIEWVSDKHSVRSPIAVIFT 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00962 759 SUPERFAMILY Subtilisin-like 125 612 IPR036852 GO:0004252|GO:0006508
Aip05g00962 759 Pfam Peptidase inhibitor I9 35 125 IPR010259 -
Aip05g00962 759 ProSitePatterns Serine proteases, subtilase family, serine active site. 539 549 IPR023828 -
Aip05g00962 759 Gene3D - 346 481 - -
Aip05g00962 759 PRINTS Subtilisin serine protease family (S8) signature 149 168 IPR015500 -
Aip05g00962 759 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Aip05g00962 759 PRINTS Subtilisin serine protease family (S8) signature 538 554 IPR015500 -
Aip05g00962 759 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 757 IPR045051 -
Aip05g00962 759 ProSiteProfiles Serine proteases, subtilase domain profile. 133 608 - -
Aip05g00962 759 PANTHER SUBTILISIN-LIKE PROTEASE SBT1.7 31 757 - -
Aip05g00962 759 CDD Peptidases_S8_3 123 575 IPR034197 -
Aip05g00962 759 Gene3D Peptidase S8/S53 domain 151 621 IPR036852 GO:0004252|GO:0006508
Aip05g00962 759 Gene3D - 625 758 - -
Aip05g00962 759 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 126 IPR037045 -
Aip05g00962 759 Pfam Subtilase family 149 587 IPR000209 GO:0006508|GO:0008236
Aip05g00962 759 Pfam Fibronectin type-III domain 655 756 IPR041469 -
Aip05g00962 759 CDD PA_subtilisin_like 352 474 - -
Aip05g00962 759 Pfam PA domain 393 460 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00962 Aip-Chr5 13471176 13473650 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00962 9 756 Subtilisin-like Serine Gene Family AT1G04110 40.304 5.43e-177 525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00962 05 13471176 13473650 Aip05g00962 05 13471176 13473650 ECH