Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00957 ATGAGCTTCTCCGTCGGCACGAGCTTCTTCTTCTCCTTTCCTCACTCACAGCGCCACCATCGCCACCCTAACCACCACAAACAAATCAAGCTCAAGCTCTTGTTCTCTTCGTCTCAGGTGAGCTCCAGCACGCCGGTGCCACCTGTAGCAGCGTCTGTCCCCACTGCCGCCGCGCCTCTCTCTCCTTTTATTCCCACTCAGTTCTGGCTCGCATATCTTTTCAGCGCCGCAGCCATCATCTCCTCCAGTCAATGCTTCCAGAAAGAAAGCAAAAAGGAAAAGATGTTGAAGGTGAAGGTGTATGCGGACCACATGTCCCAACCATCTCATGCCATTCTTATCTTCTGCAAAGTTAATGGAATAGAATTCGACGAGATTAAAGTTGAAATCTCCAAAAGACAGCAGTTATCTCCTAAATTTGCAGCTATCAACCCTTTCAAGAAACTCCCTGCTATTGTTAATGGAAGGTTCAAGCTATTCGAGAGTCATGCAATTCTTATCTATCTTGCTTCTGCCTTTCTTGGTATTGCTGATCATTGCGTTAGGTACTTGGTTGTCACATCTGCGTCACTTAAATTAAACGGAAAATCTTCTTCTTTTCAGGATGTATGGTGTGGCCCTGGAATTGGACTCGCATCAGATCATGCTTCTGCTTCTGTGGATTGTGTGGTGGCAAGGAAGAATGCTTCTTCAAGAAGGAACCTTGATGCCGTTGAGAGAGCAACACATAGGGAAGAGCCTCTTCTCTTCCTCAACTCAATGACAGTTCTTGATTGTTTAATTGATCAAAGACTATACATTGGTTTGCCTGATGCGAAGCAAAGAGTCCAAGTTTTTGGTGTGCATAGTTCTGGAAAGCAACTTGCAGAGGATGTTGATTTTGAAAAGCTTGTCTTCCGAACTGTTGGATTCTCAGGAGCAGATATAAGAAACCTTGTCAATGAAGCAGCAATAATGATGGTGAGGAAAGGGCATTCAAAAATTTCCCAGCAGGACATTGTTGATGTATTAGATAAACAACTGCTTGAGGACAACATTTGCTTTTTCATCTTTTTCAAGGCCTGTGACACCACTGCCAGAACCCACCGCTTTGCGACGTCGGGAAGGTCTGAAACTGTAAGAGCCACCCTCGATGCAGTTGAGGAAGTCATAGAAGAAAGAGATCTCGATCCCTTGTTTTCAGAGAGGTATACTTTATTTTGGATAATGCTACTACTTAGCAAGCTTGCATTCAGCTACTATGTGGAGGCACGAACGTGGTCTGAGTTTGATTTGCAGAGTACCATTCAGATGGGGAAAAAGAAATTAGTAGAGACGCGCTATTCTCCATGCTATATCAACGGGATGATCACCCACCTGAAAAACATTAATGTCGTCGCGAAGCTAGCGGAGATCGATGCAATTGGGTTCGGATTCGTGAAGAGGATTCCAAAATGGGCAGTGAAGCAGAGTATAATGATAATACAACTAGTGAAGGCATACGATGTGGACACAATACACTTATAG 1506 0.4436 MSFSVGTSFFFSFPHSQRHHRHPNHHKQIKLKLLFSSSQVSSSTPVPPVAASVPTAAAPLSPFIPTQFWLAYLFSAAAIISSSQCFQKESKKEKMLKVKVYADHMSQPSHAILIFCKVNGIEFDEIKVEISKRQQLSPKFAAINPFKKLPAIVNGRFKLFESHAILIYLASAFLGIADHCVRYLVVTSASLKLNGKSSSFQDVWCGPGIGLASDHASASVDCVVARKNASSRRNLDAVERATHREEPLLFLNSMTVLDCLIDQRLYIGLPDAKQRVQVFGVHSSGKQLAEDVDFEKLVFRTVGFSGADIRNLVNEAAIMMVRKGHSKISQQDIVDVLDKQLLEDNICFFIFFKACDTTARTHRFATSGRSETVRATLDAVEEVIEERDLDPLFSERYTLFWIMLLLSKLAFSYYVEARTWSEFDLQSTIQMGKKKLVETRYSPCYINGMITHLKNINVVAKLAEIDAIGFGFVKRIPKWAVKQSIMIIQLVKAYDVDTIHL 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00957 501 Pfam AAA+ lid domain 291 333 IPR041569 -
Aip05g00957 501 PANTHER ATP-DEPENDENT ZINC METALLOPROTEASE FTSH 12, CHLOROPLASTIC 260 346 - -
Aip05g00957 501 Pfam Glutathione S-transferase, N-terminal domain 98 170 IPR004045 -
Aip05g00957 501 CDD GST_N_Theta 98 173 IPR040075 -
Aip05g00957 501 PANTHER ATP-DEPENDENT PROTEASE 260 346 - -
Aip05g00957 501 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 96 177 IPR004045 -
Aip05g00957 501 SUPERFAMILY Thioredoxin-like 91 173 IPR036249 -
Aip05g00957 501 Gene3D - 270 342 - -
Aip05g00957 501 Gene3D Glutaredoxin 79 174 - -
Aip05g00957 501 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 260 344 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00957 Aip-Chr5 13254274 13262103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00957 95 292 Glutathione S-transferase Gene Family AT5G41210 38.756 3.19e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00957 K03798 - ahf:112747943 264.233