Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00955 atgaataaagcatatgatagagtggaatggaatttctTAGAAAAAGTGTTAATGGCCTTCGGGTTCATTGAGGATCGGGTGCAGCTAGTCATGAAGTGCGTCAGAAGTGCGAGCTACAGGTTCAAGGTGAATGGGGAGTTGTCACAGAAGGTGATACCCCAAAGAGGTCTGAGGCAAGGGGATCCTTTATCTCCTTATTTGTTTATAATAGCAGCAGAGGTTTTCACAATTCTTATGAATGAGGCTCACACAAATGGAGTTATACTTGGTTTCAAAGTCACACCTAATGCCCCTACCATCACTCACCTCCTATTTGCAGATGACTGTATTATTTTAGCTGAGGCAAAGGAAGAGGAGATATACCAGATCATTTTGATTCTAAATGAATACACCGAAGCATCAGCACAAGAAGCTATGGAAATGGTAGTTGAAAATGAAAGCAATCTATTGACTACTTACATTGTTCACGTCCAAAAGCCTCAGGGTGAGGATTCTCTTCAATATGACGACTTGCATGGATGGTACAACTCACTTCTACCAGAGAGTGCCAAGTCTCAGAACCAGCAGCGCCTTGTTTTCTCATACCGAAACGTGGTGTCTGGATTTGCTGCGAAACTGACAGCAGAAGAAGCAAAAAGCATGCAAGGGAGGGAGGAGGTTGTGTCGATTCGGGCCGAAAGGATCCTTTCTTTACACACAACTCATAGTCCAGGCTTCATGGGATTGCAAACTGGATTCCCATTGTGGAGAGGCTCCAACTATGGCAAAGGCATCATAGTTGGAGTGTTGGACACAGGAATAAACCCTTCACATCCATCATTTTCTGGTGAAGGAATGCCTTCTCCACCGGCAAAATGGAAGGGCCATTGCGAGTTTACAAAGCAGAGGACTTGTAACAACAAGCTCATTGGGGCAAGAAGCTTTGTCAAAAACTCAAGCAGGGATCTTCCTTTCGATGATGTTGGCCACGGCACTCACACGGCCAGCACGGCCGCAGGGAGGTTTGTGCAGGGTGCAAGTATCTTTGGCAATGCTAACGGTACAGCTTCTGGCATGGCACCCTTTGCCCATTTAGCAATTTACAAAGTTTGCCAACTTGATGGTTGCTATGAAAGTGCAATCATAGCTGGTATGGACGCTGCCATTGAAGATGGCGTGGACATACTTTCCCTCTCTCTTGGAGGACCCCCTTTTGAATTCTTTGAAGATTCAATTGCATTGGGCGCCTTTGCAGCCATTCGCAATGGCATTTTTGTTAGTTGTTCAGCTGGGAATGAAGGTCCTGGCGATAGTACATTGTCCAATGAGGCTCCATGGATTCTCACCGTTGGTGCTAGCTCCATTGACAGAAAAATAAGTGCATCAGCCAAACTTGGCAATGGAAAAGAATTTCATGGGGAATCAGCATTCCAACCCAAGGACTTTGCACCAACGCTATTGCCACTTGTGTATGCAGGAGAAAATGGAAATGAATCTTGTGCATTCTGTGCTCCAGGATCATTGGAGAGTGTGGATGTTCAGGGTAAGGTAGTATTGTGTGAGATAGGTGGAGATATTGCAAGAATAGACAAGGGACAAGAAGTTAAGAATGCTGGTGGTGCTGCCATGATCCTCATGAACAGTGAGATTAGAGGTTATACTACCCTTGCTGACCCTCATGTTCTTCCTGCAGCACATGTGAGTTACCATGCTGGATTAGAAATCAAGGAATATATAAACTCAACCTCAGCACCAACAGCAACAGTCTTGTTTAGAGGAACTATCATCGGAGATCCATTTGCCCCAGTTGTTGCTTCCTTTTCCTCCAGAGGTACTTCAATGTCTTGCCCTCATCTCAGTGGCATTGCTGCTTTGTTGAAGAAGTCTCACCCAGACTGGTCCCCAGCTGCCATAAAATCAGCAATAATGACCACTGCTCACAAAGCAAACCTTGAAGGTGAACCTATATTGGACCAATGGCTTGAACCAGCTGATGCATTTGCAACTGGCTCTGGACATGTCAACCCTCTCCAAGCAAATGATCCAGGACTCATCTATGATATTGAACCAAACGATTACATTCCTTATCTATGTGGTTTGGGTTACACAGACAAACAAGTTGGACTGACAAATGTTGGGCCTGCAAATTCGACTTATGTTGTGGAAGTTGAAGCGCCTTTGGCTGTTGAAATGAGCATAAGCCCTGCTACGTTAACATTCCAAGAGGTGAAAGAGAAGCTTAGATATCTGGTTGAGTTCATCCCTGAAGATGAAAATCTCAGAGGGAATAACACTTTTGTTCAGGGCTCTATTAAGTGGGTGTCTCTGTCTGGAGAGTACTCAGTTAGCATCCCCATATCTGTCATCTTCAATTGA 2355 0.4425 MNKAYDRVEWNFLEKVLMAFGFIEDRVQLVMKCVRSASYRFKVNGELSQKVIPQRGLRQGDPLSPYLFIIAAEVFTILMNEAHTNGVILGFKVTPNAPTITHLLFADDCIILAEAKEEEIYQIILILNEYTEASAQEAMEMVVENESNLLTTYIVHVQKPQGEDSLQYDDLHGWYNSLLPESAKSQNQQRLVFSYRNVVSGFAAKLTAEEAKSMQGREEVVSIRAERILSLHTTHSPGFMGLQTGFPLWRGSNYGKGIIVGVLDTGINPSHPSFSGEGMPSPPAKWKGHCEFTKQRTCNNKLIGARSFVKNSSRDLPFDDVGHGTHTASTAAGRFVQGASIFGNANGTASGMAPFAHLAIYKVCQLDGCYESAIIAGMDAAIEDGVDILSLSLGGPPFEFFEDSIALGAFAAIRNGIFVSCSAGNEGPGDSTLSNEAPWILTVGASSIDRKISASAKLGNGKEFHGESAFQPKDFAPTLLPLVYAGENGNESCAFCAPGSLESVDVQGKVVLCEIGGDIARIDKGQEVKNAGGAAMILMNSEIRGYTTLADPHVLPAAHVSYHAGLEIKEYINSTSAPTATVLFRGTIIGDPFAPVVASFSSRGTSMSCPHLSGIAALLKKSHPDWSPAAIKSAIMTTAHKANLEGEPILDQWLEPADAFATGSGHVNPLQANDPGLIYDIEPNDYIPYLCGLGYTDKQVGLTNVGPANSTYVVEVEAPLAVEMSISPATLTFQEVKEKLRYLVEFIPEDENLRGNNTFVQGSIKWVSLSGEYSVSIPISVIFN 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00955 784 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 260 271 IPR023827 -
Aip05g00955 784 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 134 232 IPR037045 -
Aip05g00955 784 Gene3D - 449 589 - -
Aip05g00955 784 ProSiteProfiles Reverse transcriptase (RT) catalytic domain profile. 1 179 IPR000477 -
Aip05g00955 784 SUPERFAMILY PA domain 481 603 IPR046450 -
Aip05g00955 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 604 702 IPR045051 -
Aip05g00955 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 135 606 IPR045051 -
Aip05g00955 784 Pfam PA domain 481 568 IPR003137 -
Aip05g00955 784 ProSiteProfiles Serine proteases, subtilase domain profile. 236 673 - -
Aip05g00955 784 PRINTS Subtilisin serine protease family (S8) signature 255 274 IPR015500 -
Aip05g00955 784 PRINTS Subtilisin serine protease family (S8) signature 603 619 IPR015500 -
Aip05g00955 784 PRINTS Subtilisin serine protease family (S8) signature 319 332 IPR015500 -
Aip05g00955 784 Pfam Fibronectin type-III domain 702 781 IPR041469 -
Aip05g00955 784 Pfam Peptidase inhibitor I9 152 232 IPR010259 -
Aip05g00955 784 Gene3D Peptidase S8/S53 domain 604 686 IPR036852 GO:0004252|GO:0006508
Aip05g00955 784 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 702 783 - -
Aip05g00955 784 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 604 702 - -
Aip05g00955 784 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 135 606 - -
Aip05g00955 784 SUPERFAMILY Subtilisin-like 231 677 IPR036852 GO:0004252|GO:0006508
Aip05g00955 784 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 2 129 IPR000477 -
Aip05g00955 784 Gene3D - 698 783 - -
Aip05g00955 784 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 702 783 IPR045051 -
Aip05g00955 784 Gene3D Peptidase S8/S53 domain 257 603 IPR036852 GO:0004252|GO:0006508
Aip05g00955 784 Pfam Subtilase family 255 646 IPR000209 GO:0006508|GO:0008236
Aip05g00955 784 CDD Peptidases_S8_3 231 640 IPR034197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00955 Aip-Chr5 13238218 13246834 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00955 152 783 Subtilisin-like Serine Gene Family AT1G04110 39.281 7.90e-166 497
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00955 - - gmx:100799902 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00955 05 13238218 13246834 Aip05g00955 05 13238218 13246834 ECH
Aip01g01593 01 58732288 58739887 Aip05g00955 05 13238218 13246834 PCT