Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00911 ATGGAACAACAACAACAACATTCATCATCAGCAAACAGCAACAACAACAACAATGGTACTAGTAGTCACATGAACAGTGGTAGCAGGCAAAGCAGCACAAGGTGGACACCAACAACGGATCAGATAAGGATATTGAAGGATTTATACTACAACAATGGAGTAAGGTCTCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTTAGACAGTATGGTAAGATTGAAGGCAAGAATGTCTTCTACTGGTTCCAGAATCACAAGGCCCGTGAGAGGCAGAAGAAGAGGTTCACTTCTGATTCTACTACTACTATCAATGCCAATAATCTTCCACTTCCAACCATGCATAGAGGATCCACCATTAACAACAACAACAATGCTCCTAATTGGATTGCATCTTCTTCTTCTTCTGCTGGGATGGTTGGTGTGGGCCAGATGGGGAATTATGGCTGTGGATCTGTTCCCATGGAGAAGAGTTTTAGGGAGTGTACAATATCTGCAGGTGGAGGAAGCAGTGTTGGTGGTGCCATAAACCACAACCTGGGATGGGTTGGTGTGGATCCTTATTCATCAACTTACACTGCTTTCTTTGACAAAATAAGGCCTGAGATTGAAACCCTTGAACAAGAACAAGGTGATGATAATAATGATGATGAAGAAATTGATGATGTCACTGAGATTGAAACCCTGCCTTTGTTCCCTATGCATGGTGAAGACATCCATGACTATTGCAGCCTCAGATCCAATAATTCTTCTTCTTCTTCTTTTAACTATGATCATCATCATCATGGATTCAACAACGGTGGTTCTCGTGCTTCCTTGGAGCTTAGTCTCAATTCCTACGGTCGCAAGTCTCCAGATTATGCTTGA 870 0.4264 MEQQQQHSSSANSNNNNNGTSSHMNSGSRQSSTRWTPTTDQIRILKDLYYNNGVRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDSTTTINANNLPLPTMHRGSTINNNNNAPNWIASSSSSAGMVGVGQMGNYGCGSVPMEKSFRECTISAGGGSSVGGAINHNLGWVGVDPYSSTYTAFFDKIRPEIETLEQEQGDDNNDDEEIDDVTEIETLPLFPMHGEDIHDYCSLRSNNSSSSSFNYDHHHHGFNNGGSRASLELSLNSYGRKSPDYA 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00911 289 CDD homeodomain 33 95 IPR001356 GO:0003677
Aip05g00911 289 Pfam Homeodomain 32 93 IPR001356 GO:0003677
Aip05g00911 289 Gene3D - 24 93 - -
Aip05g00911 289 SUPERFAMILY Homeodomain-like 11 95 IPR009057 -
Aip05g00911 289 MobiDBLite consensus disorder prediction 1 37 - -
Aip05g00911 289 ProSiteProfiles 'Homeobox' domain profile. 28 94 IPR001356 GO:0003677
Aip05g00911 289 SMART HOX_1 30 98 IPR001356 GO:0003677
Aip05g00911 289 PANTHER PROTEIN WUSCHEL 1 283 - -
Aip05g00911 289 MobiDBLite consensus disorder prediction 99 114 - -
Aip05g00911 289 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 283 IPR044555 GO:0003700|GO:0099402
Aip05g00911 289 MobiDBLite consensus disorder prediction 93 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00911 Aip-Chr5 12608472 12610084 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00911 28 279 Wox Gene Family AT2G17950 40.614 2.69e-47 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Aip05g00911 Homeodomain 1.2e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00911 - - adu:107488063 472.626