Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00902 ATGGCTTCTCTGGCTGTCCCCACCCTCGAAATCGCCGCCGCCTTAGGGATCGAGCTCAAGTTCAACTCCAACTGCAACGGCGACTTCGATAACACATCTGGTTCGCGAAAGAGAAGCGGTTCTTGTCGACGGTGGCGAATTCGACGAGTCAGATCATATTGGAGAATGAAGTACCTGAAATCCATGGTTGGATGGAAGGAAAAGCAACCAAAGAAGATGAAGAGACAACATGTCATTACTTTGTCTACATTGAATAGTGCAAATAGtgtgaaggtgaagcgggtgaaggaagaatgggagcattccgacccatggcatccgacggagCTCGGCCACAAGTCCGACGGCCAGACCATCGAGTGGCTCCTTCGCCAGGCCGAGCCCTCAATCATCGCCACCACCGGAACCGGAACCACTCCCACCAGCTTCTCCTCCGTTTCCGTCTCCGTACGCGGCGGTGCTGGCTCTCTCTCTTCTCCTTCCTCAACCTCCGCATCGTCTTCGCTCGACCACAAGCCCTTGCTCGCTCCCACTCCCTTCATACTCGGCAAGTGCATACACACTGACGACAACGCTTCCGCCAAGGACGACGACGTCTCCGTGGGCCCGCCGTGGGGTCCTTAG 624 0.5032 MASLAVPTLEIAAALGIELKFNSNCNGDFDNTSGSRKRSGSCRRWRIRRVRSYWRMKYLKSMVGWKEKQPKKMKRQHVITLSTLNSANSVKVKRVKEEWEHSDPWHPTELGHKSDGQTIEWLLRQAEPSIIATTGTGTTPTSFSSVSVSVRGGAGSLSSPSSTSASSSLDHKPLLAPTPFILGKCIHTDDNASAKDDDVSVGPPWGP 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00902 207 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 109 204 IPR005333 GO:0003700
Aip05g00902 207 MobiDBLite consensus disorder prediction 150 170 - -
Aip05g00902 207 Pfam TCP family transcription factor 109 167 IPR017887 -
Aip05g00902 207 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 109 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00902 Aip-Chr5 12470331 12473403 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00902 109 202 TCP Transcription Factor Family AT5G23280 60.825 5.75e-28 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Aip05g00902 TCP 8.5e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00902 K16221 - aip:110269354 168.318