Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00875 ATGGATACGATTCAAAAGCCACTACTAAGCATAGCCAACTTTGAGCTCCAACCGCTCCACATGGCCGCCATGCTCGTAATCCCACTGATGTTGCTGCTAGGTTTAGTCTCTAGAATCCGCCGAAGGCCACCGTATCCACCAGGGCCTAAAGGCTTACCCATCATAGGCAACATGCTTATGATGGAACAATTAACACACCGTGGGCTGGCTAAACTAGCAAGAGAATACGGCGGAATCTTCCATTTGCGAATGGGGTTCCTCCACATGGTGGCGATTTCCGACCCTGACTCAGCACGCCAAGTCCTCCAAGTCCAAGACAACATCTTCTCCAACCGTCCAGCCACCATAGCCATAAGCTACCTAACCTACGACCGCGCGGACATGGCCTTCGCCCACTACGGCCCCTTCTGGCGCCAGATGCGTAAGCTCTGTGTCATGAAGCTCTTCAGCCGCAAGCGCCAAGAGTCATGGGAGTCCGTCAGAGACGAAGTCGACAAGGTGGTCGGTTCCGTCGTCTCCAACACCGGAAAACCCGTCAACATTGGCGAACTCGTTTTCAACCTTACCAAGAACATCATCTACCGCGCCGCCTTCGGGTCCAGTTCCCAAGAAGGTCAAGACGAGTTCATCAAGATCCTTCAGGAATTCTCGAAGCTGTTTGGAGCTTTCAACGTCGCAGATTTCATCCCTTTCCTTGGTGGAATCGATCCTCAGGGCCTTAACAACAGGCTCGTCAAGGCTCGAGCTGCGTTGGACAGTTTCATTGACGGGATCATCGATGAGCATGTTCACAAGGTGAAGAACAACAACAACAACAATGATCACAGTAATAATATTGAAGAGTCTGATATGGTGGATGAGTTGTTGGCTTTCTACAGCGAGGAGGCCAAGCTAAACAATGAAGCGGACGATCTGCACAACTCTATCAAACTCACAAAGGACAACATCAAAGCCATCATTATGGACGTGATGTTTGGAGGTACAGAGACGGTAGCGTCGGCAATAGAGTGGGCAATGGCAGAACTCATGAGAAGCCCAGAAGATCTGAAGCGGGTTCAACAAGAGCTGGCCCAAGTTGTGGGCCTGGACCGTCGGGTAGAGGAGTCCGACTTCGAGAAGCTCACCTACCTCCGATGCGTACTCAAGGAGACCCTTTGCCTCCACCTGTCGATCCCCCTCCTCTTCCATCAAACAGCGGAAGAAACAACAATTGGAGGCAACTTTATCCCAAAGTGGGTGCACTTAAAGCTGTACGCGCTTGAGCTGGCGGTGGCCCATCTACTCCACTGCTTCACGTGGGAGCTTCCCGACGGGATGAAGCCGAGCGAGATGGACATGAGCGACGTCTTCGGACTCACCGCTCCCAGAGCCACTCGCCTCGTCGCTGTTCCCACAAAGCGCGTGCTCTGCCCTCTCTCTTAG 1422 0.5267 MDTIQKPLLSIANFELQPLHMAAMLVIPLMLLLGLVSRIRRRPPYPPGPKGLPIIGNMLMMEQLTHRGLAKLAREYGGIFHLRMGFLHMVAISDPDSARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRQESWESVRDEVDKVVGSVVSNTGKPVNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIKILQEFSKLFGAFNVADFIPFLGGIDPQGLNNRLVKARAALDSFIDGIIDEHVHKVKNNNNNNDHSNNIEESDMVDELLAFYSEEAKLNNEADDLHNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDLKRVQQELAQVVGLDRRVEESDFEKLTYLRCVLKETLCLHLSIPLLFHQTAEETTIGGNFIPKWVHLKLYALELAVAHLLHCFTWELPDGMKPSEMDMSDVFGLTAPRATRLVAVPTKRVLCPLS 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00875 473 PANTHER CYTOCHROME P450 84A1-RELATED 13 411 - -
Aip05g00875 473 PANTHER CYTOCHROME P450 84A1-RELATED 414 472 - -
Aip05g00875 473 SUPERFAMILY Cytochrome P450 39 467 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 Pfam Cytochrome P450 46 411 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 13 411 - -
Aip05g00875 473 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 414 472 - -
Aip05g00875 473 Gene3D Cytochrome P450 38 419 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 PRINTS E-class P450 group I signature 188 206 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00875 473 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00875 Aip-Chr5 12022359 12025581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00875 53 472 Monolignol Biosynthesis Gene Families AT4G36220 67.368 0.0 633
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00875 K09755 - gmx:100783430 621.313
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00875 05 12022359 12025581 Aip05g00875 05 12022359 12025581 ECH
Aip01g00740 01 12546280 12550127 Aip05g00875 05 12022359 12025581 PCT