Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00867 ATGAACCCAAAACCGCCACGAGTCACTGCTTATGACTTGGTGGTTGGTATATATAACCAACAAGACATGGCATGGATTATTGTGACGGGGGTAATAATCAGCTTCATCACGAGTCTTTGTTGGTGGCTTCTCCGTGAAAATAACAAGAAGAAGAAGAAGAAGAAGGTGAGAAGGGGGAAGGTTCCAGAAGGGCGGTGGGGTTGGCCTATAATCGGAGAGACCCTTGATTTCATTGCCTCTGGCTACACTTCTCAACCGCAACCTCTCACCTTCTTGGAAAAGCGCAAGTCCATGTATGGGAATGTGTTCAAGACGAGCATATTGGGAAGCAGTGTGATAGTGTCGACGGAGGTGGAGGTGAACAAGGTGGTTCTGATGAACCAAGGGAACATGTTCGTCCCTGCTTATCCCAAATCAATAAGGGAACTCATGGGGGAACACTCCATACTCAACATGAACGGCACCCTCCACAGGAAGATGCATGCACTCATCGGAGGCTTCCTCCGATCCCCGCAGCTCAAGGCTCGAATCACCACTGACATTGAACGCGCTGTCAAACAATGCTTGGCCACTTGGACCTCGCACCAATCAATATACGTTCAAGATCAAGTCAAAATGATTACGTTTAGTGTATTGGTTAAAGTTTTGATGAGCGTTGGTGCTGGTGAAGAGCTCAAGTTGTTGAAGAAAGAATTTGAAGAGTTCATCAAAGGGTTAATTTGCTTGCCCCTCAAGTTTCCAGGAACAAGGCTATACAAATCCTTGAAGGCGAAAGAAAGAATGGTGAAGATTGTGAAGAGGATAATAGAGGAGAGGAAAAAGAAGAAGAAGGAAAAATGTAGTAATGAAGAGGAGAAGGATGTGGTGGACGTGGTGTTAGGGAATGAGTGGAATCCGGAGCTGACGTTGGAAATGATGAGCTCGAACATAATAGAGATGATGATACCTGGTGAAGAGACCCTTCCTACTGCCATGACCATCGCTCTCTTCTTCCTTTCTAACTCCCCTCTTGCTCTTTCCAAACTCCGAGAGGAGAACATGCAACTGAAGAGGCAGAAGAGTAGTAGTCCTAACTCTTCAGATGAATATGCATGGACTGATTACATGTCACTGCAATTTACTCAGAATGTCATAAGTGAAACTCTTAGAATGGCCAATATTGTCAACGGCATTTGGAGAAAAGCAGTCAAAGACGTAGAAATTAAAGGGTACTTAATTCCTAAGGGATGGTGTGTTATGGCATCACTTACCTCTGTTCACTTAGACTCCAACAACTATGAAAACCCCTTTAAGTTTGATCCATGGAGATGGGAGAAAATTGGAGCTGCGGCTAGTAACAACTGTTTTACCCCATTTGGCGGTGGACAGAGATTATGCCCTGGGTTAGAACTCTCTAGGCTAGAGCTTTCTATTTTCCTTCACCATCTTGTCACTACTTACAGATGGGTAGCTGAGACAGATGAAATAATATACTTTCCAACCGTCAAGATGAAAAGAAAGCTGCCAATTAGTGTAGAACCCATTAATGCATGA 1533 0.4429 MNPKPPRVTAYDLVVGIYNQQDMAWIIVTGVIISFITSLCWWLLRENNKKKKKKKVRRGKVPEGRWGWPIIGETLDFIASGYTSQPQPLTFLEKRKSMYGNVFKTSILGSSVIVSTEVEVNKVVLMNQGNMFVPAYPKSIRELMGEHSILNMNGTLHRKMHALIGGFLRSPQLKARITTDIERAVKQCLATWTSHQSIYVQDQVKMITFSVLVKVLMSVGAGEELKLLKKEFEEFIKGLICLPLKFPGTRLYKSLKAKERMVKIVKRIIEERKKKKKEKCSNEEEKDVVDVVLGNEWNPELTLEMMSSNIIEMMIPGEETLPTAMTIALFFLSNSPLALSKLREENMQLKRQKSSSPNSSDEYAWTDYMSLQFTQNVISETLRMANIVNGIWRKAVKDVEIKGYLIPKGWCVMASLTSVHLDSNNYENPFKFDPWRWEKIGAAASNNCFTPFGGGQRLCPGLELSRLELSIFLHHLVTTYRWVAETDEIIYFPTVKMKRKLPISVEPINA 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00867 510 Coils Coil 266 286 - -
Aip05g00867 510 PANTHER CYTOCHROME P450 FAMILY BRASSINOSTEROID OXIDASE 38 505 - -
Aip05g00867 510 Pfam Cytochrome P450 66 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PANTHER CYTOCHROME P450 26 38 505 - -
Aip05g00867 510 SUPERFAMILY Cytochrome P450 57 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Aip05g00867 510 PRINTS E-class P450 group IV signature 90 113 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS E-class P450 group IV signature 371 387 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS E-class P450 group IV signature 420 438 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS E-class P450 group IV signature 443 459 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS E-class P450 group IV signature 459 477 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 Gene3D Cytochrome P450 49 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS P450 superfamily signature 316 333 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00867 510 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00867 Aip-Chr5 11797901 11801288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00867 60 481 Cytochrome P450 AT3G13730 52.482 3.99e-162 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00867 K12637 - gmx:100799030 682.174