Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00862 ATGAACTACTGTTGTATTTTCTCTTCTTCAAATGGTCAACTATCTTACTCCCTTTATATTGTTTTCATCTTCTTGTTTTCAATCTTTACAAGGAAAGACAGGCCACTGCTAACCGGTTATTATATGATGCAATTTTTCCTACTTGGACTAGTTGGAATAACAATAAAAGAAGGATGTTACCTAGTGGGTCTAGATAACACATCGCCCACGTTTGCATCTGCTATGCAAAACTCAGTTCCAGCCTTAACTTTTCTGATGGCTGCAGTACTAAGATATGAGAGTGTGCACTTGAATAGGCTAGATGGTTTTGCTAAGGTTCTTGGAGTAGTTGCTTCTGTTGGAGGAGCATCAATCATCACTCTTTACAAGGGACCTACCATCTATGCTCCATATTCAACATTGAATCATAAACAATCATTGTCTATGTTGGGGGATGCCACAGGAAAGAACTGGAACTTGGGTTGCATCTGTCTCTTTGGTCACTGCTTATGTTGGTCTGCTTGGATTGTAATGCAAGCATCTGTTCTCAAAAAGTACTCTGCCCCACTCTCAGTTTCTGCCTTTACTTGCTTCTTTGGTATCCTGCAATTTGCAACAATCGCAGCGTTTTTCGAGAGAGATTACAAGGCCTGGCAATTCAATTCTAGTAGTGAAATCTACAGTGTCTTGTATGCGGGACTAGTGAGTTCAGGGATAGCAGCAGCAATACAGATATGGGCTATTGCTAAGGGAGGACCAGTGTTTGCTTCAATTTATCTACCTTTACAGACATTAATGGTAGCCTTGATGGCATCCATTCTTTTAGGGGAAGAATTCTTCTTGGGAGGGATTATTGGAGCTTTATTGATTATAACAGGCTTATACCTTGTTGTGTGGGGAAAAAGTGAAGAAACAAAATATGGCAAAGAGGTCATAGCCCCTATGGAGTCCAAGAATCATGGTGAAGGAATTTGTGACAATGCTTCCATCATCCAACCTTTGATTCTTACCCAAAACACTTAG 1002 0.4032 MNYCCIFSSSNGQLSYSLYIVFIFLFSIFTRKDRPLLTGYYMMQFFLLGLVGITIKEGCYLVGLDNTSPTFASAMQNSVPALTFLMAAVLRYESVHLNRLDGFAKVLGVVASVGGASIITLYKGPTIYAPYSTLNHKQSLSMLGDATGKNWNLGCICLFGHCLCWSAWIVMQASVLKKYSAPLSVSAFTCFFGILQFATIAAFFERDYKAWQFNSSSEIYSVLYAGLVSSGIAAAIQIWAIAKGGPVFASIYLPLQTLMVALMASILLGEEFFLGGIIGALLIITGLYLVVWGKSEETKYGKEVIAPMESKNHGEGICDNASIIQPLILTQNT 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00862 333 PANTHER WAT1-RELATED PROTEIN 28 304 IPR030184 GO:0016021|GO:0022857
Aip05g00862 333 PANTHER WAT1-RELATED PROTEIN 28 304 - -
Aip05g00862 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 20 111 - -
Aip05g00862 333 SUPERFAMILY Multidrug resistance efflux transporter EmrE 199 295 - -
Aip05g00862 333 Pfam EamA-like transporter family 16 119 IPR000620 GO:0016020|GO:0016021
Aip05g00862 333 Pfam EamA-like transporter family 153 291 IPR000620 GO:0016020|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00862 Aip-Chr5 11762059 11764181 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00862 31 314 Nodulin-like Gene Family AT1G75500 60.825 2.48e-124 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00862 - - gmx:100790386 436.802