Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00853 ATGAGAGGAACAAGTATGGCCAATTCTGTGAACTTTCTTCTGCTTCTTTCTCTACTAGCCTTTGCACCCTTCTGCCATTGTGACAAGAAAGTAGGCGGTTACCTCTACCCGCAATATTATGACAAGTCTTGCCCCAGAGCTCAAGAGATTGTCAAGTCCATTGTGGCCAAAGCTGTCGCGAAAGAAACACGCATGGCTGCTTCCCTGCTGAGATTGCATTTTCATGACTGCTTTGTCAAGGGCTGTGATGGATCGGTGTTGCTAGATAGCAGTGGAACCATTATCAGCGAGAAGAGGTCAAATCCCAACCGTAATTCGGCTCGAGGATTTGAAGTTATTGATGAAATCAAATCAGCACTAGAGAAGGAATGCCCTGAGATTGTGTCCTGTGCTGACATTCTAGCCATAGCTGCCAGAGATTCAACTGTTCTTACTGGTGGACCAAGCTGGGAAGTGCCTCTAGGCAGAAGGGATTCTCTTGATGCAAGTATAAGTGGTTCTAACTACAACATTCCTGCCCCCAACAACACATTTCAAACCATCCTAACTAAATTCAAGCTTAAAGGCCTTGATATTGTTGATCTAGTTGCTTTATCTGGTAGCCATACTATAGGAGACTCAAGGTGCACCAGCTTCAGGCAAAGACTCTACAACCAAACTGGCAACGGCAAAGCAGACTTCACTCTTGACCAATACTATGCTGCTCAATTGCGCACTCATTGCCCAAGATCCGGCGGAGACCAGAATCTGTTTGTGCTAGACTTTGTCAGCCCAGCAAAATTTGATAACAGCTACTACAAGAACTTACTGACCAAGAGGGGTTTGTTAAGCTCTGATGAAATTCTCTTGACACAGAATACAGTGTCTGCAGGTTTAGTGAAGAAGTATGCTGAAAGTAATGATCTTTTCTTTGAACAATTTGCCAAGTCCATGGTTAAGATGGGGAACATTACTCCCTTAACAGGCTCAAGGGGTGAGATCAGAAAGAACTGCAGAAGGGTTAATGCTTAA 1011 0.4431 MRGTSMANSVNFLLLLSLLAFAPFCHCDKKVGGYLYPQYYDKSCPRAQEIVKSIVAKAVAKETRMAASLLRLHFHDCFVKGCDGSVLLDSSGTIISEKRSNPNRNSARGFEVIDEIKSALEKECPEIVSCADILAIAARDSTVLTGGPSWEVPLGRRDSLDASISGSNYNIPAPNNTFQTILTKFKLKGLDIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKADFTLDQYYAAQLRTHCPRSGGDQNLFVLDFVSPAKFDNSYYKNLLTKRGLLSSDEILLTQNTVSAGLVKKYAESNDLFFEQFAKSMVKMGNITPLTGSRGEIRKNCRRVNA 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00853 336 SUPERFAMILY Heme-dependent peroxidases 35 335 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 44 63 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 68 88 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 108 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 127 137 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 146 161 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 193 205 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 252 267 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 268 285 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PANTHER PEROXIDASE 72-RELATED 10 335 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 CDD secretory_peroxidase 35 334 IPR033905 GO:0004601|GO:0042744
Aip05g00853 336 Gene3D Peroxidase, domain 2 172 315 - -
Aip05g00853 336 Gene3D - 39 335 - -
Aip05g00853 336 ProSitePatterns Peroxidases active site signature. 66 77 IPR019794 GO:0004601
Aip05g00853 336 Pfam Peroxidase 51 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 194 204 IPR019793 -
Aip05g00853 336 ProSiteProfiles Plant heme peroxidase family profile. 34 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PANTHER PEROXIDASE 10 335 - -
Aip05g00853 336 PRINTS Haem peroxidase superfamily signature 66 80 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Haem peroxidase superfamily signature 128 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Haem peroxidase superfamily signature 146 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Haem peroxidase superfamily signature 194 209 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00853 336 PRINTS Haem peroxidase superfamily signature 254 269 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00853 Aip-Chr5 11622518 11624313 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00853 6 335 Peroxidase AT5G66390 75.676 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00853 K00430 - gmx:100788562 592.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00853 05 11622518 11624313 Aip05g00853 05 11622518 11624313 ECH