Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00830 ATGAGCAACACAACAAGTGGGGGGTACGTTGGGTCCAGCAACATCACCGGCTATCTCTATGGCATAGGAATCTACCTTGGGATCCTCTTTTTTATCACCACCATCACCCTAACCTATTACTTCTGCACCAGACACCATCAGCAACAACTCCCTCGTGCAGCTCCTAATAGGAGACAGAATGCGCTTGAAGTTGGAATAGATGAAGAATCACTTGTGAGTTATCCAAAGTTGTTGTACTCTGAAGCAAAAAAACTGAAGAAGAATGATTCAACTTGTGCATGCTGTTCTATATGCCTTGCAGATTACAAGGGCAGTGATATGCTTAGGGTGTTACCTGATTGTGGCCACCAATTCCATATCAAGTGCATAGATCCATGGCTGAGGCTTCACCCTACTTGTCCACTCTGCAGAGCCTCTCCCATTCCGACGCCTCTTTCAACTCCCTTGCCTCCGAGATTTATCCCTCGGAGATTTATTATCCCTTGCCTCATTCCGCCGAGGTGA 504 0.4663 MSNTTSGGYVGSSNITGYLYGIGIYLGILFFITTITLTYYFCTRHHQQQLPRAAPNRRQNALEVGIDEESLVSYPKLLYSEAKKLKKNDSTCACCSICLADYKGSDMLRVLPDCGHQFHIKCIDPWLRLHPTCPLCRASPIPTPLSTPLPPRFIPRRFIIPCLIPPR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00830 167 SUPERFAMILY RING/U-box 94 142 - -
Aip05g00830 167 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 52 141 IPR013083 -
Aip05g00830 167 CDD RING-H2_PA-TM-RING 94 137 - -
Aip05g00830 167 PANTHER RING-H2 FINGER PROTEIN ATL71-RELATED 4 150 - -
Aip05g00830 167 ProSiteProfiles Zinc finger RING-type profile. 95 137 IPR001841 -
Aip05g00830 167 SMART ring_2 95 136 IPR001841 -
Aip05g00830 167 Pfam Ring finger domain 95 137 IPR001841 -
Aip05g00830 167 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 4 150 IPR045899 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00830 Aip-Chr5 11099681 11100184 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00830 6 149 C3H Transcription Factor Family AT5G06490 45.402 1.28e-46 149