Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00829 ATGGATAATAACCGGTTTTCATCGCAGAAACACTCAACCAAGAGTGGTTATGAGCCGTCAGACACAGAGACAGAGTGGCAAGAGGTTCCGAGACATGAACGAGAAAGAAAGAACATTGCTTTGGATCCTGAAGATGCAAAAGCTTTCACTCTAATTGCCAAGAGTCCATTGGCACTACACAGGAGGCACCAATACAACCATTCCAAGTTCGAAACTGAAACCTCATCAGCCACCACAACAATAGCTTCTGTTCCAAGCCAACCTCGGAGAAGGCAACACCATAGCAAGTCACCCTTTAAGCTTCGAGTAGCTGGCGATGATGATGGCGATGATACTGATGATCACGGTCCCCCACCATCACCCATAAGAGGTTTGAACACAAGGAGAAATATAAGCCCTTTGCCAAAACCAGATGTTGGGAGAACCGTGTCTCCTTACAGCAGAAAGCATCACGGTTCTTCAGGTCATAGAGGCATGGTTCTCAATGCACCTTCAGTGGCAGAGATCAATGAAATCATAGCAGAGGTGAAACTATCCAATGACCCTAGCACTTTGGATGAGTCAATGACTTCCACCACTGAGTCTATTCAACCGGGTGATCTTTTCTTCTCTCGAGAAAGCAGTGCCTTGCAGGGCAAGAAATCTTCGCTGTTGCCCCAAAAACTTCAACAATATGGATATTATAGCCCAAGTCCTGCAGGAACCGCCATGAGTCCCCACATTAGAGGTCTCCCTGCTTCTTCCGTTGAGGATGAAAGCAACGGAAATGGCATGAACATCCGAGGAATCGCCTCATCTGGTGTGTCTAGATCAAGTTCAGCTGTTACAAGCAGAAAGGGCGGTAGCAGTATGACGAGCGATGGTAGTGTGAAGACAACTGATAGCATGAGGAAATTCACAGCCAACAGGAAGAAGAGCCAGAAGGATGCATCATGGTTTGCTTGCATGAGGACAGGAAACTGCAGGACATCGATGAAATCGCCGGAGCGTAAAAGGCCAATTGAGGCTTCTTTCATTGGCAGGGCTATTGTGGTGGAAACCCTCCCACAATTCTGGGCTGATAAGCACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTAGTGTCTCAGGGCTCTTGCCCTCATATTCTGCTCAAAGGACCCTCCGGTTCTGGGAAAAGAGAACTAGCAATGGCTCTTCTACGCGAAATATATGGTGATGCATGCTGCAATATGTCCCATGAGTTAAGGAGCTTCCCTATTCAGGACAAGAGGCCTATCAAAGTATGTGTTTCAATAGCATCTAGTGCGCATCACATGGAGCTCAATGTAAGCATGGAACCAAATGCTAAATATGCTTTGCTGGGATTAATCAAAGAAATTAGCAATATATATGCAATGACACCCGAAGTCAGCAATGTTAATTTCAAGCCTGATTATAAAGTAATACTTCTTTATGGCGTTGATAAAGCAGTGGAGAACATCCAGCACATGATTAAATGGATTATAGACCGGTATTCGGATATATGTAAACTAGTTCTCTGCTGTGAAGATGATGCAGCCATTGTTGAGCCTGTTAAAAACCGTTTTAAAATTATCAAAGTTGATGCACCTCAAACTCACCAAATTGCTGAAGTTCTTATTCATATAGCAAAGAAAGAGGAAATTGATGTATCCCTTAATTTTGCCGCAAAGATTGCCATAAAATCAAAGCAAAACCTGAGGAAAGCTATCATGGCACTCGAAGCTTGCAAGGCGCACAACTATCCATTTTCAGAAGAACAACCTATTCCAATTGGATGGGAGGACATGGTAATAGAAGTAGCTGCAGAGATTCTAGCTGATCCATCATTTTCACGGCAAGAAATTCTCTGCCTAACTTGCTTCCTGCTATATATCTTACTCTCAATAAGAGGAAAATTTCAAATGCTTCTCTTGGATTTTGTCCACCCCAAACTGATCCTGCAGAAATTGGTGGAAGAGCTCCTGAAAAGAATTGAGGTCAGCTTAAAAAGAGAAGTCTACTATTGGCATGCGTATTATGAAAGAAGACTGCCACCCGGAACAACAGCTTTACTAAAGTTAGAAGAATTTGTGGCCAAGTTCATGAGCATATACAGAAAAAGCTGCGGTACTCAACAATATGTGTAG 2160 0.4347 MDNNRFSSQKHSTKSGYEPSDTETEWQEVPRHERERKNIALDPEDAKAFTLIAKSPLALHRRHQYNHSKFETETSSATTTIASVPSQPRRRQHHSKSPFKLRVAGDDDGDDTDDHGPPPSPIRGLNTRRNISPLPKPDVGRTVSPYSRKHHGSSGHRGMVLNAPSVAEINEIIAEVKLSNDPSTLDESMTSTTESIQPGDLFFSRESSALQGKKSSLLPQKLQQYGYYSPSPAGTAMSPHIRGLPASSVEDESNGNGMNIRGIASSGVSRSSSAVTSRKGGSSMTSDGSVKTTDSMRKFTANRKKSQKDASWFACMRTGNCRTSMKSPERKRPIEASFIGRAIVVETLPQFWADKHQPASLNGFICNKQEAQLLKELVSQGSCPHILLKGPSGSGKRELAMALLREIYGDACCNMSHELRSFPIQDKRPIKVCVSIASSAHHMELNVSMEPNAKYALLGLIKEISNIYAMTPEVSNVNFKPDYKVILLYGVDKAVENIQHMIKWIIDRYSDICKLVLCCEDDAAIVEPVKNRFKIIKVDAPQTHQIAEVLIHIAKKEEIDVSLNFAAKIAIKSKQNLRKAIMALEACKAHNYPFSEEQPIPIGWEDMVIEVAAEILADPSFSRQEILCLTCFLLYILLSIRGKFQMLLLDFVHPKLILQKLVEELLKRIEVSLKREVYYWHAYYERRLPPGTTALLKLEEFVAKFMSIYRKSCGTQQYV 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00829 719 Gene3D - 603 709 - -
Aip05g00829 719 CDD AAA 367 407 - -
Aip05g00829 719 SUPERFAMILY post-AAA+ oligomerization domain-like 604 709 IPR008921 GO:0003677|GO:0006260
Aip05g00829 719 MobiDBLite consensus disorder prediction 99 117 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 56 159 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 70 88 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 24 43 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 261 296 - -
Aip05g00829 719 Gene3D - 543 600 - -
Aip05g00829 719 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 175 718 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 261 303 - -
Aip05g00829 719 PANTHER OS02G0704966 PROTEIN 175 718 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 1 22 - -
Aip05g00829 719 MobiDBLite consensus disorder prediction 1 44 - -
Aip05g00829 719 Gene3D - 350 541 IPR027417 -
Aip05g00829 719 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 350 589 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00829 Aip-Chr5 11093364 11096735 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00829 351 710 Core DNA Replication Machinery Family AT5G27740 38.398 2.61e-78 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00829 K10756 - gmx:100795321 907.901
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00829 05 11093364 11096735 Aip05g00829 05 11093364 11096735 ECH