Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00809 ATGATGCTGCTACCGTGCGACTACTACGACTCCAAAACGGCAGTTCTCTTTTGCCGCGCCGACTCTGCCAAGCTCTGCATCTCATGTGACCAGCACGTGCACTCTGCCAACGCCCTCTCACTCAAGCACGTGCGCTCTCAGATTTGCAATAACTGCCGCAACGAACCTGCCACCGTGCGATACGCCACCAACAATCTCGTCCTCTGCAACGACTGCGACTCCGACACACACAACAGTTCCACCATCGCTTCCTCCCTCCACACCCACCACCGCCTCCATGGCTTCTCCGGCTGTCCCCCCGCCCTCGAAATCGCCGCCGCCTTAGGGATCGAGCTCAAGTTCAACTCCAACTACAACAGCGGCTCCGGTAATACATCCAGTTCACGAAAGGAAAGTGGTTCTTGTCGACGGTGGCGAATCCGACGAGCCAGATGTCGGTGA 441 0.576 MMLLPCDYYDSKTAVLFCRADSAKLCISCDQHVHSANALSLKHVRSQICNNCRNEPATVRYATNNLVLCNDCDSDTHNSSTIASSLHTHHRLHGFSGCPPALEIAAALGIELKFNSNYNSGSGNTSSSRKESGSCRRWRIRRARCR 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00809 146 CDD Bbox1_BBX-like 5 48 - -
Aip05g00809 146 SMART bboxneu5 1 48 IPR000315 GO:0008270
Aip05g00809 146 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 116 - -
Aip05g00809 146 ProSiteProfiles Zinc finger B-box type profile. 6 48 IPR000315 GO:0008270
Aip05g00809 146 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 14-RELATED 4 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00809 Aip-Chr5 10790490 10790930 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00809 4 113 C2C2-CO-like Transcription Factor Family AT1G28050 59.091 3.76e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00809 - - aip:107640130 253.447