Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00773 ATGAGAGTTCCCGTTTCGTCATCCCAAAACAATAAACCCGTAGAAAGCACAATCGGCCTCGAGCCCACATCGGTGCTCGACCTGTGTAGAAGCCCCACCCCTGAGAAGGCAGTGGCTGCGCTGGTGGCTACTGCACCCAACACACAGCAAGAGTGTCTTGACCAGCTGGAGGACCATGTCCTGCACAATCTTGATTGGGACTCCATCATGAAGGACCTTGGATTCCACGAAGACTCCAACCCACCCTTGTTCAAGACCACCCTCCCTAATGTCCCTGACTTCTCTCCTTCCTTCGACCCACACTCCGAATTCCCAGACATCCAAACCATGTCCTACAACTACGCCAACGCCACTGCCACCCTCGACCACCTCCTCCACGACACCTCCAATAATTCTGCTGCCACCGGCTTCGATTTCATAGAGGAGCTCATCCGTGCTGCCGATTGCTTCGACACCAACCACCTCCACGTGGCTCACGTCATATTGGAGCGACTCAATCAACGCCTCCGATCCCCCGCGGGTGCAAAGCCTCTCCAACGCGCCGCCTTCTACTTCAAGGAAGCTCTCCAGGGCCTCCTCTCCGGTTCCAATCGCACTCCGCGTTTCTCCTCCCTCGTTGAGATCGTCCACTGCGTCAGAACATTCAAGGCCTTCTCTGGAATCTCACCGATCCCTATGTTCTCCATCTTCACCACCAACCAGGCGCTCCTTGAGGCCTTTCATGGCTCCTCCTTCATGCACGTCCTTGATTTTGATATCGGATTAGGGATCCAGTATGCTTCGCTCATGAAGGAGATTGCAGAAAAGGCGGATTCCTTGAAACACGGATCGCCGCTTCTGCGCATCACCGCCGTCGTTCCCGAAGAGTACGCCGTCGAGAGCAAACTGATTCGGGAGAATCTCAGCCAGTTCGCGCACGAGCTCAGGATCCGCGTCCAGGTCGAGTTTGTGCCCCTCTGCAACTTCGAGACGCTGTCCTTTAAGGCGGTGAAGTTCGTCGATGGCGAGAAAACCGCCGTTCTTCTCTCGCCTGCGATATTCCGACGGCTCGGATCCGCTGGGAGCACCGCGGCCTTCCTGGCGGACGTTCGGAGGGTTTCGCCGAGCGTGGTGGTGTTCGTGGACGGGGAGGGGTGGACGGAGGCCGCGGCAGCGGCGTCGTTCCGGCGCGGCGTGGTGAGCAGTCTAGAGTTCTACTCGATGATGCTGGAGTCGCTGGACGCGTCGATGGTTGCGGGAGGGGAGTGGGTGAGGAGGATCGAGATGCTTCTGCTGCGCCCGAAGATACTAGCGGCGGTGGAGGGAGCGGGGCGGAGGGTTCCGCCGTGGAGAGAGGCTTTCTATGGTGCCGGAATGAGGCCGGTGCAGTTAAGCCAGTTCGCGGATTTTCAGGCGGAGTGCTTGCTGGCTAAGCGGTATGAAAATATGTTCCGAGAACCAAACTGGCTTTGTTGTTTGACTTTGACGTCACATGATCACATGAAGAAATATGTTTGGCCTGGGCAGGAAGAACATTCTGTAGCACCTCCATCGGGTGAGAGCATCTCCACAAAAGCAAAGGGGGAGAAAAACCAATGCTGCTAG 1584 0.5688 MRVPVSSSQNNKPVESTIGLEPTSVLDLCRSPTPEKAVAALVATAPNTQQECLDQLEDHVLHNLDWDSIMKDLGFHEDSNPPLFKTTLPNVPDFSPSFDPHSEFPDIQTMSYNYANATATLDHLLHDTSNNSAATGFDFIEELIRAADCFDTNHLHVAHVILERLNQRLRSPAGAKPLQRAAFYFKEALQGLLSGSNRTPRFSSLVEIVHCVRTFKAFSGISPIPMFSIFTTNQALLEAFHGSSFMHVLDFDIGLGIQYASLMKEIAEKADSLKHGSPLLRITAVVPEEYAVESKLIRENLSQFAHELRIRVQVEFVPLCNFETLSFKAVKFVDGEKTAVLLSPAIFRRLGSAGSTAAFLADVRRVSPSVVVFVDGEGWTEAAAAASFRRGVVSSLEFYSMMLESLDASMVAGGEWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKRYENMFREPNWLCCLTLTSHDHMKKYVWPGQEEHSVAPPSGESISTKAKGEKNQCC 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00773 527 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 11 494 IPR005202 -
Aip05g00773 527 PANTHER SCARECROW-LIKE PROTEIN 15 11 494 - -
Aip05g00773 527 Pfam GRAS domain family 140 478 IPR005202 -
Aip05g00773 527 MobiDBLite consensus disorder prediction 503 527 - -
Aip05g00773 527 ProSiteProfiles GRAS family profile. 130 500 IPR005202 -
Aip05g00773 527 MobiDBLite consensus disorder prediction 509 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00773 Aip-Chr5 10024412 10026467 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00773 56 471 GRAS Transcription Factor Family AT4G36710 53.167 3.83e-142 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Aip05g00773 GRAS 2.5e-73 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00773 - - aip:107640116 924.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00773 05 10024412 10026467 Aip05g00773 05 10024412 10026467 ECH