Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00747 ATGGCCTCCATGGCCGCCATTACTACTACAGTCCTCCTCTTCTTTATTATGATCCTCTACTCATCAACAATAAATGCAACAACCACCACCACTCAACAGCGCTTCAAAGAAGCTCCCAAATTCTACAACTCCCCAAACTGTCCCGCCATTCAGCAATCAGACAAGTGCTCCGATGACGCAGTGCACGTCGCAATGACACTCGACGCCACCTACCTCCGGGGTTCCATGGCCGCCATCCTCTCCGTCCTCCAGCACTCATCCTGCCCTGAGAATATCCTCTTCCACTTCGTCACCGCCGCCTCCTCCTCCACGTCGTTCCTTAACACCACCCTCTCCTCTTCCTTCCCCTACCTTGTCCTCTCAACTACGCCCGCAACTACCTCGCCAACCTCCTCCCCTCCTGCGTCCGCCGTATCGTCTACCTTGACTCCGACCTCGTCCTGCGCATACTTCACTCCATCGTTCTGGTCCAACCCTTCCCTGTCGCTCACATTCGCCTCCCGAAGGCCCTGCTACTTCAACACTGGCGTCATGGTCATCGATCTCGAGCGGTGGCGTGCCGGCGACTACACCACCAAGATCGAGGAGTGGATGGAGCTTCAGAAGAGGATGCGGATCTACGAGCTCGGGTCTTTGCCGCCGTTTCTTTTGGTTTTCGCCGGGAACATAGGCCCGGTGGATCATAGGTGGAACCAGCACGGTCTTGGCGGGGACAACTTTCGCGGGCTTTGCAGGGACTTGCATCCGGGCCCGGTAAGCCTACTGCATTGGAGCGGGAAAGGGAAGCCCTGGGCCAGGCTCGACGCCAATCGCCCTTGCCCGTTGGACGCCTTATGGACTCCCTATGACCTCCTCCAGACACCTTTCGCGCTCGAGGCCTAA 882 0.5771 MASMAAITTTVLLFFIMILYSSTINATTTTTQQRFKEAPKFYNSPNCPAIQQSDKCSDDAVHVAMTLDATYLRGSMAAILSVLQHSSCPENILFHFVTAASSSTSFLNTTLSSSFPYLVLSTTPATTSPTSSPPASAVSSTLTPTSSCAYFTPSFWSNPSLSLTFASRRPCYFNTGVMVIDLERWRAGDYTTKIEEWMELQKRMRIYELGSLPPFLLVFAGNIGPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWARLDANRPCPLDALWTPYDLLQTPFALEA 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00747 293 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 128 272 IPR029044 -
Aip05g00747 293 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 148 293 - -
Aip05g00747 293 PANTHER HEXOSYLTRANSFERASE 148 293 - -
Aip05g00747 293 PANTHER HEXOSYLTRANSFERASE 10 141 - -
Aip05g00747 293 Pfam Glycosyl transferase family 8 137 266 IPR002495 GO:0016757
Aip05g00747 293 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 10 141 - -
Aip05g00747 293 SUPERFAMILY Nucleotide-diphospho-sugar transferases 61 284 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00747 Aip-Chr5 9615825 9616792 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00747 17 291 Glycosyltransferase AT3G50760 55.655 1.12e-126 363
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00747 K20893 - pvy:116139683 384.415
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00747 05 9615825 9616792 Aip05g00747 05 9615825 9616792 ECH
Aip05g00747 05 9615825 9616792 Aip07g02599 07 107827620 107829557 ECH