Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00742 ATGTTCTCCATCACCAGCATCCCAACTCAATCACAACAGGTTAATGGAACAGACTTTTCATGCCCAGTGGATTCACCTTCTTCCTGTGGAACATATGTGACATACATCGCTAAATCTCCAAACTTCTTGAGCCTTTCTAACATATCTGACATATTTGACACCAGCCCTTTATCCATTGCAAGAGCAAGTAACATAAAGAATGAGGGTGACAAGCTGGTTCCAGGCCAAGTCTTACTGATACCTGTCACTTGTGGTTGCACTCAAAACCAATCTTTCGCCAATATCACCTATGAGCTAAGGCAGGGTGATATGTACGACTTTGTCTCAAAAACAACATATGAGAATCTCACAAATTGGCGTGCTGTCAACGATTCAAACCCAGATTTGAATCCAGTTCTGCTGCCAGTAGGTGTGAAAGTATTGTTCCCTTTATTCTGCAGGTGCCCTTCTAAGAAGCAGTTACAAAAAGGGATAGAATATATGATCACCTATGTGTGGCAGAACAATGACAATGTTTCCTCTGTAGCAGCCAAGTTTGGTGCATCGGCAGTGGACATATTGTCCGAAAACAACTATGGTGGAAACTTCACAGCTGCAACCTATCTTCCGGTTTTGATTCCTGTGACGAAGTTGCCGGTTCTTACTCAACCCGAGCCTTCACATGGAAGAAAGAGAAGCATTCAAATCCCTGTTATAATCAGTATTAGCCTGGGGTTCACCCTTGTTGTTGCTGTTATAGTAATATCAATGGTTTATGCTTATCTTTATCAGAGAAAGAGGACTTTGAATAGGAGAGACTCATCTGCTGGGACAGCAGATAAGCTACTCTCTGGAGTCTCAGGCTACGTGAGTAAGCCAACCGTGTATGAAGCCAATGAGGTTATCAAAGCCACCATGAATCTCAGCGAACAGTGCAAGCTTGGGGGCACAGTTTACAAGGCCAAAATAGAAGGGCAGGTCTTGGCAGTGAAAAAAGTGAATCAAGTAGTTTCTGAGGAGCTGAATATTCTGCAGAAGGTGAATCATGGAAACCTGGTGAAACTGATGGGTGTATCTTCAGACAGTGATGGAAACCATTTCCTGGTTTATGAGTATGCTGATAACGGGTCCCTTGATGGGTGGCTCTTCTCCAAGTTGTCTTTGAAGGCCTCGCTTACATGGTATCAGAGGATTAACATAGCATTGGATGTTGCCATGGGTCTGCAATACTTGCATGAGCACACTTATCCAAGAATAGTCCATAGGGACATCACAACAAGTAACATCCTTCTTGACTCCAACTTCAAGGCCAAGATAGGGAACTTCTCCATGGTCAGAACTACTACAAATCCCATGATTTCCAAGATCGATGTCTTTGCTTTCGGGGTTGTTCTGATTGAGTTGCTTACAGGCAGGAAAGCCATGACAACAAAGGCAGATGGTGAGGTAGTAATGCTGTGGAAGGATATTAGGAAGATGTTTGAAGTGGAAGATGAAAAGGAAAAGGAGGAATGTCTGAGAAGATGGATGGATCCTAAGCTAGAGTGCCTTTACCCTGTGGATTATGCTCTCAGCTTGGCCACGTTGGCCGCGAATTGCACGGCCGATGTATCATTGTCTAGACCAACCATGGCAGAAGTTGTTCTTGGCCTCTCCCTTCTCACTCAACCATCTCAAGCTGCACTAGAGAGATCATTGACTTCTTCTGCGTTGGAAGCAGAGGTTACTCATGTGGCTACTCCCATAGCAGCACGTTAA 1737 0.4421 MFSITSIPTQSQQVNGTDFSCPVDSPSSCGTYVTYIAKSPNFLSLSNISDIFDTSPLSIARASNIKNEGDKLVPGQVLLIPVTCGCTQNQSFANITYELRQGDMYDFVSKTTYENLTNWRAVNDSNPDLNPVLLPVGVKVLFPLFCRCPSKKQLQKGIEYMITYVWQNNDNVSSVAAKFGASAVDILSENNYGGNFTAATYLPVLIPVTKLPVLTQPEPSHGRKRSIQIPVIISISLGFTLVVAVIVISMVYAYLYQRKRTLNRRDSSAGTADKLLSGVSGYVSKPTVYEANEVIKATMNLSEQCKLGGTVYKAKIEGQVLAVKKVNQVVSEELNILQKVNHGNLVKLMGVSSDSDGNHFLVYEYADNGSLDGWLFSKLSLKASLTWYQRINIALDVAMGLQYLHEHTYPRIVHRDITTSNILLDSNFKAKIGNFSMVRTTTNPMISKIDVFAFGVVLIELLTGRKAMTTKADGEVVMLWKDIRKMFEVEDEKEKEECLRRWMDPKLECLYPVDYALSLATLAANCTADVSLSRPTMAEVVLGLSLLTQPSQAALERSLTSSALEAEVTHVATPIAAR 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00742 578 ProSiteProfiles Protein kinase domain profile. 269 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00742 578 SUPERFAMILY Protein kinase-like (PK-like) 287 548 IPR011009 -
Aip05g00742 578 Gene3D LysM domain 44 94 IPR036779 -
Aip05g00742 578 Gene3D Transferase(Phosphotransferase) domain 1 445 565 - -
Aip05g00742 578 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 12 578 - -
Aip05g00742 578 Gene3D Phosphorylase Kinase; domain 1 277 365 - -
Aip05g00742 578 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 12 578 - -
Aip05g00742 578 ProSitePatterns Tyrosine protein kinases specific active-site signature. 412 424 IPR008266 GO:0004672|GO:0006468
Aip05g00742 578 Gene3D Transferase(Phosphotransferase) domain 1 366 444 - -
Aip05g00742 578 Pfam Protein tyrosine and serine/threonine kinase 327 442 IPR001245 GO:0004672|GO:0006468
Aip05g00742 578 ProSiteProfiles LysM domain profile. 33 80 IPR018392 -
Aip05g00742 578 Pfam LysM domain 44 81 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00742 Aip-Chr5 9572796 9574532 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00742 1 551 Receptor kinase-like Gene Family AT2G33580 29.734 1.02e-70 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Aip05g00742 PK_Tyr_Ser-Thr 9.6e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00742 - - gmx:100301877 806.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00742 05 9572796 9574532 Aip05g00742 05 9572796 9574532 ECH