Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00737 ATGCTTTCAGGTTATTTTGATTCAGATTTGGCTCAGGGTATCCAGGAAGCAATCTTCAGAGTTATAGCTGCTATTCTTCATCTTGGAAACATTAACTTTGCAAAATCAGAGGAAGAAACTGATTCATCAGTTCTAGAAAATGAAGAGTCCAAGTTGCATCTCCAAATAACCGCAGAACTTCTCATGTGCGATCCTAGTGCTTTGGAAGATGTACTTTGTAAGCGTGTGATGATTACCCCAGAGGAAGTTATTAAAAGAAGTCTTGATCCTCTTGGTGCAACGTCCAAAAAATCAATGTCTCAATTGGGCAAGACCCAGAGTCAAAATGTCTCATTGGTGTTCTTGACATATATGGCTTTGAAAGCTTTAAGAATAACAGTTTTGAGCAGTTTTGTATTAATTTCACAAATGAAAAGCTGCAGCAACATTTCAACCAGGTATGAGCATGTGTTTAAGATGGAACAAGAGAGATATACAAAAGAAGGGATTGACTGGAACTACTTAGAATTTGTGGATAATCAAGATGTACTTGATCTAATTGAAAAGTATGTAGACATCTTTGCAATTATTACAAAGAATTTCCAAGATGTCTCCTCTGAATTTGCCTTCAAAATGTTATGCCCTCATTATCTAAAGCAATCCTTTTGA 648 0.3611 MLSGYFDSDLAQGIQEAIFRVIAAILHLGNINFAKSEEETDSSVLENEESKLHLQITAELLMCDPSALEDVLCKRVMITPEEVIKRSLDPLGATSKKSMSQLGKTQSQNVSLVFLTYMALKALRITVLSSFVLISQMKSCSNISTRYEHVFKMEQERYTKEGIDWNYLEFVDNQDVLDLIEKYVDIFAIITKNFQDVSSEFAFKMLCPHYLKQSF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00737 215 PANTHER MYOSIN 11 184 - -
Aip05g00737 215 Pfam Myosin head (motor domain) 148 191 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g00737 215 Pfam Myosin head (motor domain) 13 92 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g00737 215 PANTHER MYOSIN MOTOR DOMAIN PROTEIN AND DIL DOMAIN PROTEIN 11 184 - -
Aip05g00737 215 Gene3D Myosin VI head, motor domain, U50 subdomain 13 100 - -
Aip05g00737 215 ProSiteProfiles Myosin motor domain profile. 1 215 IPR001609 GO:0003774|GO:0005524|GO:0016459
Aip05g00737 215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 12 192 IPR027417 -
Aip05g00737 215 Gene3D - 136 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00737 Aip-Chr5 9454634 9456386 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00737 15 182 Myosins gene family AT1G08730 53.191 4.42e-50 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00737 K10357 - gmx:100803485 186.808