Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00729 ATGGAGCACGCCGAATTATCCACTGAACAGGTTCTGAGGAGGGACATCCCATGGGAGACCTACGTGTCCACTAAGCTCATCTCTGGTACAACCCTTCAGCTCCTACGCCGTTACGACCATCGTTCTGAAACCCACCGTGCCCAATTGCTACATGAGGATGGTCCGGCTTATGTTCGCATGTTTGTTCATGTATTGCGTGATATTTTCAAAGAAGAGACTGTAGAATATGTTCTAGCTTTGATAGATGAGATGCTCACAGCCAATCCTAAAAGAGCAAGACTGTTTCATGACAAGACCCTTGCAGATGAAGACACTTATGAACCTTTCTTAATTGTTGAAGTATTTCAGCATTTGGCATATTGGCTTCTATCAGAGTTGCTTTGGAGAGGAAATTGGTTCATACAAGAGAAAAGTTGTAAGATCCTTGCTTTAATAGTTAGTGCCAGGCCCAAAAATCAGAATGGCGGTGTTGTAAATTCAGAATCAAACTCAAAGAAAGCATTTACCACGATTGAAGATGTTCTAGGAGGATTGGTAAAATGGCTTTGCGAACAGTTGAAGAAGCCTTCTCATCCTACACGGGGTGTTCCAACTGCCATCAATTGCCTGGCAACTCTACTTAAGGAACATGTGGTTAGGTCTTCCTTTGTTCAAGCAGACGGAATCAAGTTGCTTGTACCTTTGATTTCTCCTGCATCCACCCAACAGTCTATTCAGCTTCTTTATGAAACATGTCTCTGTGTATGGCTCTTATCCTACTATGAACCGGCAATTGAATACTTGACTACCTCAAGAACCCTTCCTTCTCTTGTTGATGTTGTTAAGAGTTCTACAAAAGAGAAGGTTGTTAGAGTTGTTGTCCTTACCTTTAAGAACTTGCTATCAAAAGGGACATTGGCTGCTCAAATGATTGACCTTCAGCTACCACAAGTTGTTCAGAGTTTGAAAGCACAAGCATGGAGTGATGAGGACTTGTTGGAGGGATTGAATTACCTGGAGGATGGGCTTAAGGATAGCATTAAGAAATTAAGTTCTTTTGATGTGTATAAGCAAGAAGTTCTCCTTGGCAATCTGGATTGGTCTCCCATGCACAAAGATCCCATATTTTGGCGAGATAATATTACCCATTTTGAAGAGAATGACTTCCAGATTATAAGGGTTCTAATAACAATTTTGGACACTGGTAGCAATCCAAGGACTTTGGCTGTTGCTTGCTTTGACCTTTCGCAGTTCATCCAGCACCATCCTTCTGGGCGTCTCATTGTGGCGGACCTCAAGGCGAAGGAACGAGTAATGAAACTAATGAATCATGAGAATGCTGAAGTTACTAAGAATGCGCTGCTCTGCATCCAAAGACTTTTCTTAGGTGCAAAGTATGCCAGCTTCTTGCAGGCTTAG 1398 0.4235 MEHAELSTEQVLRRDIPWETYVSTKLISGTTLQLLRRYDHRSETHRAQLLHEDGPAYVRMFVHVLRDIFKEETVEYVLALIDEMLTANPKRARLFHDKTLADEDTYEPFLIVEVFQHLAYWLLSELLWRGNWFIQEKSCKILALIVSARPKNQNGGVVNSESNSKKAFTTIEDVLGGLVKWLCEQLKKPSHPTRGVPTAINCLATLLKEHVVRSSFVQADGIKLLVPLISPASTQQSIQLLYETCLCVWLLSYYEPAIEYLTTSRTLPSLVDVVKSSTKEKVVRVVVLTFKNLLSKGTLAAQMIDLQLPQVVQSLKAQAWSDEDLLEGLNYLEDGLKDSIKKLSSFDVYKQEVLLGNLDWSPMHKDPIFWRDNITHFEENDFQIIRVLITILDTGSNPRTLAVACFDLSQFIQHHPSGRLIVADLKAKERVMKLMNHENAEVTKNALLCIQRLFLGAKYASFLQA 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00729 465 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 465 IPR004908 GO:0000221|GO:0046961|GO:1902600
Aip05g00729 465 Pfam V-ATPase subunit H 342 454 IPR011987 GO:0000221|GO:1902600
Aip05g00729 465 SMART arm_5 208 253 IPR000225 GO:0005515
Aip05g00729 465 SMART arm_5 415 455 IPR000225 GO:0005515
Aip05g00729 465 SMART arm_5 254 295 IPR000225 GO:0005515
Aip05g00729 465 Gene3D - 357 457 IPR038497 -
Aip05g00729 465 Gene3D - 3 344 IPR011989 -
Aip05g00729 465 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 1 465 - -
Aip05g00729 465 SUPERFAMILY ARM repeat 8 455 IPR016024 -
Aip05g00729 465 Pfam V-ATPase subunit H 3 336 IPR004908 GO:0000221|GO:0046961|GO:1902600
Aip05g00729 465 PIRSF V-ATP_synth_H 1 464 IPR004908 GO:0000221|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00729 Aip-Chr5 9367436 9372446 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00729 1 465 Primary Pumps ATPases(2) AT3G42050 74.409 0.0 712