Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00726 ATGAACCCAGCTCAAAGGAGATCTCCTTCGCCTCCTCCATCGGCAACCTCTTCCACTCTCCACATGCTTCTTCCCAACCATTCCTCCAACTCCTTACAAGGGTTCCCTCCTGCTGGCTCCGCAGGAGGGTCTTTCGGGCAATTCACATGGGTTCCCGACAGCGGCGCCGGCCATGAGGGAGCAGCTAACAACCCTGCTGCTGCTCCTCCTGGCCATCACGAGATTAACGTGGTGGAAGGGCAAGGCCTTTCGCTCTCGCTTTCGTCTTCGCTTCAGCACTTGGAAGCTGCGAAAGCGGAGGAACTGAGGATGGGAGAAGGCGGTTTTCTATTTTACAATCAAGGGGGAGGAGCGGCGGCTTCTAATTCGGGTCATTTTCCGTACAAGAACCATTTGCAAGGTGGCATGGTAGGACAGGGGCACCTTGCTGGGTTCGCTTCTGCTTCATCTTCTTCGTCCTTAGGGGTAGTTCACGTTCTTAGGAATTCAAAGTATGTGAAAGCCGCACAAGAGTTGCTTGAGGAGTTTTGCAGTGTTGGAAGGGGCCACTTCAAGAAAAACAAGTTCAGTAGGCAGAATTCAAACCCTAATTCCACCGCCTCTCCTTCATCTTCCAAAGATCCTCCTCCTGCTGCAGCTCCACCTCCGCCTCCTTTGTCAGCTTCCGACAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGACGAGGTGGACCGAAGATACAACCACTACTGCGAGCAAATGCAGATGGTGGTGAACTCATTTGACGTGGTGATGGGGTACGGGGCGGCGGTGCCGTACACGGCGCTGGCGCAGAAGGCGATGTCGAGGCATTTCCGGTGCCTGAAGGACGCAATAACGACGCAGCTGAAGCATTCGTGCGAGGTGCTGGGGGAGAAGGAGGGGGCGGGAGGGTCAGGGCTGACGAAGGGGGAGACGCCGCGGCTGAAGATGTTGGAGCAGAGCCTACGGCAGCAGAGGGCGTTCCAGCAGATGGGTATGATGGAACAAGAAGCTTGGAGACCTCAGAGAGGCTTGCCTGAACGTTCTGTCAACATTTTGAGAGCTTGGCTTTTTGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTCTTGGCGAGGCAGACTGGCCTCTCCAGAAATCAGGTATCAAACTGGTTCATAAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACAAAAAGAAGCAGAGGAGTGTGGGGCAGCGGAAGAAGGCGAAGAAGAGGAAGAAGAAGAACAAAACAACAGCAGCAACGGTGGGCAGCAACAAGCACAAAATCCAAGCACAACGAGTGGCGGTGAAAGCGAAATACAAGTAGAAGGGTTTTCGGAAAACCAAGAGGGCGGCAGCAATAGCATAATGGTTGCGCAAGGTGGAATGGCGTCGGAGATGATGCCCCCACAACAGTCACAGAGATCGATGGCAAGCGATGACACGTGTCGACATGGCAGCTACGTAGCAGGTGCTGAATATGGGACCGCGTCTACTACTGCTGCTGCTGCCGCTGCTGACATTGGATCCGCTACCCTCATTAGGTTCGGGACCACCGCCGGTGACGTGTCACTCACCCTAGGGTTACGCCACGCCGGGAACGTCCCCCGACAAAACCCCTTTTTCTCTTAG 1686 0.5409 MNPAQRRSPSPPPSATSSTLHMLLPNHSSNSLQGFPPAGSAGGSFGQFTWVPDSGAGHEGAANNPAAAPPGHHEINVVEGQGLSLSLSSSLQHLEAAKAEELRMGEGGFLFYNQGGGAAASNSGHFPYKNHLQGGMVGQGHLAGFASASSSSSLGVVHVLRNSKYVKAAQELLEEFCSVGRGHFKKNKFSRQNSNPNSTASPSSSKDPPPAAAPPPPPLSASDRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDVVMGYGAAVPYTALAQKAMSRHFRCLKDAITTQLKHSCEVLGEKEGAGGSGLTKGETPRLKMLEQSLRQQRAFQQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQEQKEAEECGAAEEGEEEEEEEQNNSSNGGQQQAQNPSTTSGGESEIQVEGFSENQEGGSNSIMVAQGGMASEMMPPQQSQRSMASDDTCRHGSYVAGAEYGTASTTAAAAAADIGSATLIRFGTTAGDVSLTLGLRHAGNVPRQNPFFS 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00726 561 MobiDBLite consensus disorder prediction 1 72 - -
Aip05g00726 561 MobiDBLite consensus disorder prediction 436 473 - -
Aip05g00726 561 MobiDBLite consensus disorder prediction 187 224 - -
Aip05g00726 561 MobiDBLite consensus disorder prediction 420 435 - -
Aip05g00726 561 Gene3D - 347 409 - -
Aip05g00726 561 ProSiteProfiles 'Homeobox' domain profile. 341 404 IPR001356 GO:0003677
Aip05g00726 561 Pfam Associated with HOX 159 291 IPR006563 -
Aip05g00726 561 MobiDBLite consensus disorder prediction 11 37 - -
Aip05g00726 561 SMART HOX_1 344 408 IPR001356 GO:0003677
Aip05g00726 561 MobiDBLite consensus disorder prediction 207 221 - -
Aip05g00726 561 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 1 554 - -
Aip05g00726 561 SUPERFAMILY Homeodomain-like 345 411 IPR009057 -
Aip05g00726 561 MobiDBLite consensus disorder prediction 189 206 - -
Aip05g00726 561 SMART prehox3 154 292 IPR006563 -
Aip05g00726 561 MobiDBLite consensus disorder prediction 412 473 - -
Aip05g00726 561 Pfam Homeobox KN domain 361 400 IPR008422 GO:0003677|GO:0006355
Aip05g00726 561 CDD homeodomain 344 405 IPR001356 GO:0003677
Aip05g00726 561 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00726 Aip-Chr5 9270354 9276643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00726 154 561 Homeobox Transcription Factor Family AT2G23760 54.088 1.22e-150 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Aip05g00726 POX 2.2e-50 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00726 - - adu:107487904 816.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00726 05 9270354 9276643 Aip05g00726 05 9270354 9276643 ECH