Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00706 ATGTCATTTTCCTTGTTTTCAACGCCGCAGCAACAGCAATCGCCTTTCCAGCAGAGTAGCATGTTTCAGCAGCCGCAACAGCAGCAGCTCCAACTTCAATTTCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACTACAACTGCAGCAGCAGCAGCAGCAACAGCAACAGCAACAGCAGTTGTTTCTGTTCACCAATGATAAAACTCCCGCTACTTACAGTACCAACTGGGAGCGGATATTGGAGTATCGGGACGAAAGCCAGAGGCTTGATCAATGTAGTCGTCTTTATGATTCTTCTGTTTCCAATGATGGGTTTGAGCTTGATGCAAGCCACATTGTTCAGGAACTTGGTGGAATCAGCACTGGTATGGAAAGACAGAAAACTGTGCTGCTGGAATTGATGTCTGTTGTCAAGGATATGTTACGCAACACTGAGGTAGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTTCTTCATCCCAGTGGGGGAGCATCAAGTGCCACTGCCCCATCACAGACTGCTGGTGCAACTGCATCATCTGGTCCAAGTAGCCAACCAACTGCTACATCTATAGTGCCTGTTTTTGACTTCTATAGTGGTCTTCCAAAGAAACCGTCACCCTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGGTGAATGTCATCAGTGGATTGAAGAATTGGAGCAGCTTATTCTTTTGGACTCTGAGAGAAATGGTTCCTCTAATGGATCCTCGTTGTTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGATTTTTTTGTTCATGTGGCTGCAAAGGTCGAGAGCATTCATCAATATATTGAATCTATGAAATCAGCATATCTAGCTGATCAACGCCGACGGGGGGAGGTGAATGATCCATTTTTAGAGGCTGACCGGCGAGAAACTGCAAGACAAGAAGCCGCCTCAAAAAGAGTTCACCCGACGTTGCATTTACCTGCAAATTCACAGCCCTCAACTCAAGTTGCAGGGTTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGGCTGCCCCACAGACATCCACAGCAACTACATCATCATCAGGAAGTGGACTCTCTCTTTTTAGTACACCTTCTTCTGCTCCATCATCTTCTATGTCATCGTCTTTGTTTGCAACCCCATCAACTCCTGCCCTAGGGTCTTCTTGGTTTGGATCATCTACTGCTACACCTCAAACCTCACTTTTTGGTTCTACATCCTCCTTACCTGGTCCTGCTTCAACTCCTTCTTTGTTTAGTAATACTGCTCCCTTGTTTAGTTCAACTCCAGCTGGAAATTCGCTCTTCTCAAGTTCATTCGTGTCAGGTGCTGCAACAGGATCCGGTGCGAGCTTTGGAGGATCTAAAAATCCGCGGCCGAAAACCCGACCTGCTCGCCGCTAA 1428 0.4601 MSFSLFSTPQQQQSPFQQSSMFQQPQQQQLQLQFQQQQQQQQQQQQQLQLQQQQQQQQQQQQLFLFTNDKTPATYSTNWERILEYRDESQRLDQCSRLYDSSVSNDGFELDASHIVQELGGISTGMERQKTVLLELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTAGATASSGPSSQPTATSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLGECHQWIEELEQLILLDSERNGSSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALAAPQTSTATTSSSGSGLSLFSTPSSAPSSSMSSSLFATPSTPALGSSWFGSSTATPQTSLFGSTSSLPGPASTPSLFSNTAPLFSSTPAGNSLFSSSFVSGAATGSGASFGGSKNPRPKTRPARR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00706 475 MobiDBLite consensus disorder prediction 1 24 - -
Aip05g00706 475 MobiDBLite consensus disorder prediction 325 374 - -
Aip05g00706 475 MobiDBLite consensus disorder prediction 165 190 - -
Aip05g00706 475 Coils Coil 27 63 - -
Aip05g00706 475 MobiDBLite consensus disorder prediction 168 190 - -
Aip05g00706 475 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 6 464 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Aip05g00706 475 MobiDBLite consensus disorder prediction 301 320 - -
Aip05g00706 475 Gene3D - 208 298 - -
Aip05g00706 475 MobiDBLite consensus disorder prediction 301 374 - -
Aip05g00706 475 MobiDBLite consensus disorder prediction 453 475 - -
Aip05g00706 475 PANTHER NUCLEOPORIN P58/P45 6 464 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00706 63 475 NAC Transcription Factor Family AT4G37130 61.959 1.56e-166 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00706 K14307 - gmx:100805204 555.058