Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00695 ATGGATCGAACGCCGGCAGCGGCGGCGGGAGCGGGCGGAGCAGGGATGGAGTTGCCAATCATGCACGAAAGTGATCGCTACGACTTCGTCCGTGACATAGGCTCCGGGAATTTCGGTGTGGCGAGGCTCATGAGGGACAAGCTCACCAAGGAGCTTGTTGCTGTTAAGTACATCGAACGCGGTGATAAGATTGATGAAAATGTTAAGAGAGAAATCATTAATCACAGGTCTCTAAGACATCCTAACATCATCAGGTTTAAAGAGGTCATTTTGACACCTACTCATTTGGCAATCGTAATGGAATATGCATCTGGAGGAGAATTGTTTGAGCGAATCTGCAACGCAGGGCGTTTTACTGAAGACGAGGCTCGGTTCTTCTTTCAACAACTCATATCTGGGGTCAGCTATTGCCATGCAATGCAAGTATGTCACCGGGACTTGAAGTTGGAGAACACTTTGTTGGATGGAACTTCAGCTCTTCATTTGAAGATATGTGATTTTGGGTACTCCAAGTCTTCAGTGCTTCATTCACAACCAAAGTCAACAGTGGGGACTCCAGCATATATTGCTCCGGAAGTGTTGCTAAAGCAAGAGTATGATGGCAAGGTCGCGGATGTTTGGTCATGTGGAGTAACCTTATATGTGATGCTAGTGGGATCATATCCTTTTGAAGATCCTAATGAACCTAAAGACTTCAGGAAGACAATTCAGAGGGTCCTCAGCGTCCAGTACTCTATCCCAGACTTTGTTCAAGTATCTCCAGAGTGTCGCCACCTTATCTCAAGGATCTTTGTTTTTGACCCTGCTGAGAGGATCACCATTCCTGAAATCTTGAAAAATGAATGGTTTCTGAAGAATCTTCCGGCAGAGTTGATTGATGAAAAAATTATGGGTAGCCAATTTGAAGAGCCAGATCAACCCATGCAGAGCATTGATGAGATCATGCAGATAATTTCAGAAGCTACAATACCACCGGTTGGGGCACATACGTTAGACCATTTTATGATGGATGATAACATCGATGTGGATGATGACATGGATGACTTGGACTCTGACTTTGAGCTTGATGTAGATAGCAGTGGGGAGATAGTATATGCTATATAA 1104 0.4466 MDRTPAAAAGAGGAGMELPIMHESDRYDFVRDIGSGNFGVARLMRDKLTKELVAVKYIERGDKIDENVKREIINHRSLRHPNIIRFKEVILTPTHLAIVMEYASGGELFERICNAGRFTEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGTSALHLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKQEYDGKVADVWSCGVTLYVMLVGSYPFEDPNEPKDFRKTIQRVLSVQYSIPDFVQVSPECRHLISRIFVFDPAERITIPEILKNEWFLKNLPAELIDEKIMGSQFEEPDQPMQSIDEIMQIISEATIPPVGAHTLDHFMMDDNIDVDDDMDDLDSDFELDVDSSGEIVYAI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00695 367 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Aip05g00695 367 Gene3D Phosphorylase Kinase; domain 1 6 102 - -
Aip05g00695 367 SMART serkin_6 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00695 367 Gene3D Transferase(Phosphotransferase) domain 1 103 290 - -
Aip05g00695 367 SUPERFAMILY Protein kinase-like (PK-like) 21 324 IPR011009 -
Aip05g00695 367 PANTHER SERINE/THREONINE KINASE 18 361 - -
Aip05g00695 367 Pfam Protein kinase domain 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00695 367 ProSiteProfiles Protein kinase domain profile. 27 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00695 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Aip05g00695 367 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 18 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00695 Aip-Chr5 8846649 8851261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00695 26 294 CBL-interacting serine-threonine protein kinases AT5G25110 44.366 7.53e-69 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Aip05g00695 Pkinase 3.8e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00695 K14498 - gmx:100783967 619.387
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00695 05 8846649 8851261 Aip05g00695 05 8846649 8851261 ECH
Aip01g00883 01 16271374 16277331 Aip05g00695 05 8846649 8851261 PCT