Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00687 ATGCGGTGGTTACCATCGAATATATTCACCCCTCCTCATCCTCATTCCTCCTCTTCTTCTACTTCACATTCTCCTTCTTCTTCGCTTTCATCTTCGCCGTCCAATGCTCCGCCACCTGCTTTGTCAGCATTTCCATCCAGTGGCCGAACGCTGCAGACATCCACGTCCACTTCGTCCCTAACGGACCTTCTCCACCCGAGGAAGAAACCTTCCCAGGACTGGACCCGCCGCGCCTGGATCTTCGGATGCGGGATAAGGTCCTCACAAGATGATGACCTGGACGACGACGACTCCGACGCCGTTGTTCCCATGGCTCGTTCCAAAAGCATCAACGACCGCTCCTATACACGATCCCAAACCTCATCTTCCACTTCCTCCGCGATTACTGTTGCTCCTCAGCCCTTGCCCTTGCCGGAGGGGCTCTCCTTCCACCGCGGATACCGCCATAGCTCCGTTGAACGACGTTCGCCATCTCCAAAGCGCCACGCCACCGGGAACAACTTTTTCTCCTCCTCCTACAAAGGCCTTGACGAACGCGAACTTCGAGTCGATGCCCTAATCATCGATTCTGTCCCCGTCTCCAATCCCTATCCTCCCATGCGAAGTCCACAGAACATGAGAAACGATGACTTTGTTCCGTACCATTACACGCCACCAAAACATAACCATTTCTGGTCTGCACCTGAGATCATAGGAGGAGGAGGAGGAGGATTCTTTGATTTGTCTCCAAAGGGGATGGATGCTAACAGCAATAATTCTCCCCACCACAGTCCAAAGGGAACCTTGACCCCACGCCATGGCAACTCCAAAAGCCCAACAAGACCTTCTTCCCCCATACAGACCTTGTCCATTGACAACTTCAAACCTCAAGCTAGCTTTCGCCGCGATGTTATTATTGGCCCTATCAACAATGTTCATCCCTTACCCTTGCCTCCTCCCACGGCCTTGACTTCACCAACTGCTACTCATGCACAGTCCCAAGCTAGCAGAAATGAATCCTGTTCAATGCAGAGCCAATGGCAAAAGGGAAAACTCATTGGTCGAGGTACCTTTGGAAGCGTCTATGTCGCTACCAATAGAGAAACTGGAGCATTGTGCGCAATGAAAGAAGTAGAAATATTTGCTGATGATCCAAAATCTAAAGAGTGTATAAAACAGTTAGAGCAGATTAAAATTCTTAGTAACCTGAAGCATCCAAACATTGTGCAATATTATGGTAGTGAAATAGTTGGAGACAAGTTTTACATTTATCTGGAATATGTCTATCCAGGTTCAATAAACAAATACGTCCGGGAACATTGTGGTGCAGTAACGGAATCCGTTGTTAGGAATTTCACTCGCCATATTCTTTCAGGGCTAGCTTACTTGCATAGCACGAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGTTAGTTGATTCTACCGGAGTTGTCAAGCTCGCTGACTTTGGGATGTCTAAACATCTAACTGGGCATGCTGCTGATCTTTCTTTGAAGGGAAGCCCATACTGGATGGCGCCAGAGCTTATGCATGCAGTTATGCAAAGAGATAACAACTCTGATCTAGCTTTAGCTGTTGACATTTGGAGTTTGGGTTGCACAATTATTGAAATGTTCACAGGGAAGCCTCCTTGGAGCGAATACGAAGGAGCGGCAGCTATGTTTAAGGTTTTGAGGGATATACCTCCTATACCTGAACAATTGTCATCAGAGGGAAAAGATTTCCTAAGACGTTGCTTCAGAAGAAATCCAGCAGAAAGACCAAATGCATTAATGTTGTTAGATCATCGATTTGTGAAGCACTTCTAA 1812 0.4735 MRWLPSNIFTPPHPHSSSSSTSHSPSSSLSSSPSNAPPPALSAFPSSGRTLQTSTSTSSLTDLLHPRKKPSQDWTRRAWIFGCGIRSSQDDDLDDDDSDAVVPMARSKSINDRSYTRSQTSSSTSSAITVAPQPLPLPEGLSFHRGYRHSSVERRSPSPKRHATGNNFFSSSYKGLDERELRVDALIIDSVPVSNPYPPMRSPQNMRNDDFVPYHYTPPKHNHFWSAPEIIGGGGGGFFDLSPKGMDANSNNSPHHSPKGTLTPRHGNSKSPTRPSSPIQTLSIDNFKPQASFRRDVIIGPINNVHPLPLPPPTALTSPTATHAQSQASRNESCSMQSQWQKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFADDPKSKECIKQLEQIKILSNLKHPNIVQYYGSEIVGDKFYIYLEYVYPGSINKYVREHCGAVTESVVRNFTRHILSGLAYLHSTKTIHRDIKGANLLVDSTGVVKLADFGMSKHLTGHAADLSLKGSPYWMAPELMHAVMQRDNNSDLALAVDIWSLGCTIIEMFTGKPPWSEYEGAAAMFKVLRDIPPIPEQLSSEGKDFLRRCFRRNPAERPNALMLLDHRFVKHF 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00687 603 ProSiteProfiles Protein kinase domain profile. 340 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00687 603 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 602 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 10 37 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 104 135 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 109 131 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 317 334 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 1 68 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 45 65 - -
Aip05g00687 603 ProSitePatterns Protein kinases ATP-binding region signature. 346 369 IPR017441 GO:0005524
Aip05g00687 603 SUPERFAMILY Protein kinase-like (PK-like) 328 601 IPR011009 -
Aip05g00687 603 SMART serkin_6 340 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00687 603 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 602 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 312 334 - -
Aip05g00687 603 MobiDBLite consensus disorder prediction 236 285 - -
Aip05g00687 603 Pfam Protein kinase domain 341 600 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00687 603 MobiDBLite consensus disorder prediction 245 285 - -
Aip05g00687 603 Gene3D Transferase(Phosphotransferase) domain 1 336 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00687 Aip-Chr5 8704967 8707721 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00687 190 602 MAP Kinase Kinase Kinase AT5G66850 63.326 3.25e-179 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip05g00687 Pkinase 1.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00687 - - cam:101502514 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00687 05 8704967 8707721 Aip01g00891 01 16466828 16470973 PCT