Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00686 ATGGAATGTACTAATAATAAGCATCCTTTTCTTTTCTTGTTCTGGCTAGTGTTCCTCACTCCTTTAGTGTGCTCTCAACTTTACTATAATTTCTACGACTCAACTTGCCCAAACCTCACCAGAATCGTTAGATACAACGTTTTGTCAGCTATGAACAATGACACAAGGATTGCAGCTTCTCTCCTGCGCCTTCATTTCCATGATTGTTTCGTCAACGGATGTGATGGATCTGTGCTGCTTGATACAACCAGCACTTTTACTGGGGAGAAAAATGCTCGGCCTAACAAGAATTCAGTGAGAGGATTTGAGGTGATTGACACAATCAAATCAGCATTAGAGAAGGCATGTCCAGCCACTGTGTCATGTGCTGATATACTAACTCTAGCTGCAAGAGAAGCTGTTTTTCTTAGTAAAGGGCCATTTTGGGTTGTCCCTCTTGGTCGTAGAGATGGCACGACAGCAAGTGAGAGCGAGGCAAATAATTTGCCATCACCCTTTGATCCACTTGAAAATATTACAGCCAAGTTCGTTGCCAAAGGTCTTGAATTGAAGGATGTAGCAGTGCTCCTAGGTGCACACACCTTTGGGTTTGCACAATGCTTTACATTCAAGGCAAGGCTATTCAACTTTGGTGGAACTGGTAAATCGGATCCAACACTAGATGGTTCACTACTACAGAATCTACAAAACCTATGTCCAAACCAAGCTAGCTCTGACACAAACTTGGCACCCTTGGATCCTGTGACAACCAACACATTCGACAACATGTATTACAGAATTCAGAGACTTTGCTGTTTCTATGGAGAAAATGGGCCGCATTAG 822 0.4282 MECTNNKHPFLFLFWLVFLTPLVCSQLYYNFYDSTCPNLTRIVRYNVLSAMNNDTRIAASLLRLHFHDCFVNGCDGSVLLDTTSTFTGEKNARPNKNSVRGFEVIDTIKSALEKACPATVSCADILTLAAREAVFLSKGPFWVVPLGRRDGTTASESEANNLPSPFDPLENITAKFVAKGLELKDVAVLLGAHTFGFAQCFTFKARLFNFGGTGKSDPTLDGSLLQNLQNLCPNQASSDTNLAPLDPVTTNTFDNMYYRIQRLCCFYGENGPH 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00686 273 PANTHER PEROXIDASE 72-RELATED 11 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Aip05g00686 273 Gene3D - 30 162 - -
Aip05g00686 273 ProSitePatterns Peroxidases active site signature. 58 69 IPR019794 GO:0004601
Aip05g00686 273 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Haem peroxidase superfamily signature 120 137 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Haem peroxidase superfamily signature 138 150 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 SUPERFAMILY Heme-dependent peroxidases 26 260 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 Gene3D Peroxidase, domain 2 163 259 - -
Aip05g00686 273 ProSiteProfiles Plant heme peroxidase family profile. 26 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PANTHER PEROXIDASE 11 259 - -
Aip05g00686 273 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Plant peroxidase signature 138 153 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Plant peroxidase signature 100 113 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Plant peroxidase signature 119 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00686 273 CDD secretory_peroxidase 26 259 IPR033905 GO:0004601|GO:0042744
Aip05g00686 273 Pfam Peroxidase 46 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00686 Aip-Chr5 8624118 8625749 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00686 23 258 Peroxidase AT1G49570 65.272 9.75e-108 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00686 K00430 - gmx:100815708 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00686 05 8624118 8625749 Aip05g00686 05 8624118 8625749 ECH