Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g00664 | ATGTCACAGAGATCGGTGCCGGCGCCGTTCTTGACGAAGACGTATGAGTTGGTGGATGATCGTGCAACGGACGACGTGATTTCGTGGAGTGAGAGTGGCAACACTTTTGTGGTGTGGAAGCATGCCGATTTCGCTAAGGATTTGCTTCCCAATTATTTCAAGCACAACAACTTCTCCAGCTTTGTTCGCCAGCTCAACACCTATGGTTTTCGAAAGATTGTGCCAGACAAATGGGAATTTGCCAACGAACATTTTAAGCGAGGCCAAAAAGAACTTCTCTCGGAGATCAAACGCCGCAAGTCGGCGCACCCTGCGCCGCCGCCATCGGGGACCGAAAAATCCGGTGGCGACGGAAACTCTCTGTTGAACTCAGGCGGCGACGACATGGGATCTTCCTCCACCTCTTCACCTGATTCGAAGAACCCAGGATCTGTGGAAACAACAACAATAACAACAACAACAACTCCTCCTCCTCATCAGTGCGCGAATTTATCGAGCGAGAACGAGAAATTGAAGAAGGACAACGAGACGCTAAATTGCGAGCTGGCACGTGCGAAGCAGCAGTGCGATGAGTTGGTGGCTTTCTTGAGGGACTGCCTTAAGGTGTGTCCTGATCAGATCAACCGCATCATGAGGCAAGGAAAATGCGGGTCCACCCGTGATCCGGTGCAATCTGATGACACTCTAGTTGATGATGACGACAAACAAGTTGGTGAGGCCGCTGGACCCAGCACTTTGAAATTGTTTGGTGTTTGGTTGAAAGAGGAGAAGCCTAACAACAACCACAAGAGAGGGCGCCAAGGCCCAATGGGCTTTGATGGGCCTCCTGCAAAGGAGATGAAGAAGACTACTACTACAACTAATAGTAATAGTGTTGTTGACTTTGGTGGTTCCAATGTTAAGGTGATGATGAAGAGCAGCAAGGTCTGTAGCTGA | 936 | 0.4979 | MSQRSVPAPFLTKTYELVDDRATDDVISWSESGNTFVVWKHADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDKWEFANEHFKRGQKELLSEIKRRKSAHPAPPPSGTEKSGGDGNSLLNSGGDDMGSSSTSSPDSKNPGSVETTTITTTTTPPPHQCANLSSENEKLKKDNETLNCELARAKQQCDELVAFLRDCLKVCPDQINRIMRQGKCGSTRDPVQSDDTLVDDDDKQVGEAAGPSTLKLFGVWLKEEKPNNNHKRGRQGPMGFDGPPAKEMKKTTTTTNSNSVVDFGGSNVKVMMKSSKVCS | 311 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g00664 | 311 | Coils | Coil | 161 | 188 | - | - | |
Aip05g00664 | 311 | PANTHER | HEAT SHOCK TRANSCRIPTION FACTOR | 2 | 285 | IPR027725 | - | |
Aip05g00664 | 311 | ProSitePatterns | HSF-type DNA-binding domain signature. | 49 | 73 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Aip05g00664 | 311 | SMART | hsfneu3 | 6 | 99 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Aip05g00664 | 311 | MobiDBLite | consensus disorder prediction | 98 | 170 | - | - | |
Aip05g00664 | 311 | MobiDBLite | consensus disorder prediction | 257 | 292 | - | - | |
Aip05g00664 | 311 | MobiDBLite | consensus disorder prediction | 113 | 165 | - | - | |
Aip05g00664 | 311 | PANTHER | HEAT STRESS TRANSCRIPTION FACTOR B-1 | 2 | 285 | - | - | |
Aip05g00664 | 311 | Pfam | HSF-type DNA-binding | 10 | 99 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Aip05g00664 | 311 | SUPERFAMILY | "Winged helix" DNA-binding domain | 7 | 99 | IPR036390 | - | |
Aip05g00664 | 311 | Gene3D | - | 2 | 100 | IPR036388 | - | |
Aip05g00664 | 311 | PRINTS | Heat shock factor (HSF) domain signature | 10 | 33 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Aip05g00664 | 311 | PRINTS | Heat shock factor (HSF) domain signature | 48 | 60 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Aip05g00664 | 311 | PRINTS | Heat shock factor (HSF) domain signature | 61 | 73 | IPR000232 | GO:0003700|GO:0006355|GO:0043565 | |
Aip05g00664 | 311 | MobiDBLite | consensus disorder prediction | 215 | 240 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g00664 | Aip-Chr5 | 8402578 | 8405258 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip05g00664 | 2 | 311 | HSF | AT4G36990 | 48.287 | 2.54e-81 | 246 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HSF | Aip05g00664 | HSF_DNA-bind | 7.9e-33 | CL0123 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip05g00664 | K09419 | - | gmx:100791543 | 360.918 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Aip05g00664 | 05 | 8402578 | 8405258 | Aip05g00664 | 05 | 8402578 | 8405258 | ECH |