Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00651 ATGGACTGGATTCGAGGACCAACCCTCGGCAGTGGAAGCTTCGCCACCGTCAGTTTAGCCACACCCAAAAACCCTTCCCTTCCGTTCCACATTCCGGTTGCCGTTAAGTCCTCCGATCGTTTCACCTCCTCCCTCCTCGTTAATGAGGAACACGTCCTTAACCGCCTCGGTTCTTCTTGTCCTCGAATCGTTAAGTGCTTGGGCCACGACACCACCGTCGAAAACGGTGAGTCGTTTTACAACATCTTCCTCGAATACGCTTCGAACGGTACACTCGCTGATCAGATGAAGAAGAATCAAGGTGGGATGTTCGATGAGAAACAAGTAAGAAGGTACGTGAGGTCCGTCATGGAAGGGTTGAAACACATTCACGAGAATGGGTTCATTCACTGCGATATTAAGCTTCATAACATGCTTGTGTTCGAAGATGGCGAGGTGAAGATCTCGGATTTCGGGCTCGCGAAGGAGAAAGGTGCAGTGCAGCGTGGAGACAAGAAGTGGGAGTGCAGGGGAACGCCTCTCTACATGTCCCCTGAGTCGGTGAATGATAACGAGTACGAGTCTCCCGCGGATATATGGGCCCTTGGATGCGCTGCCGTGGAGATGCTCACCGGAAAGCCAGCGTGGAATGTTAAGAGTGGGTCCAACATGTGGTCGCTGCTAATTCGGATTGGAGTTGGTGAAGAAATTCCGGTGATTCCGGAGGACTTGTCCGAACAGGGGAAAGACTTTTTGAGAAAGTGTTTCGTTAAGGATCCCAGGGAGAGGTGGACGGCGGAGATGCTCGTCAACCACCCGTTTCTCGCCGATGAAGACAACCATGATGCTTTGATCCATAACGAAATCTCGCCCAAAAGTAACTTTGACTTTCCTGATTGGGATTTCACTTCCACGGTGACTGATTCTGCTGTCACCACTGTTTTGTCGCCGGGGGATTGGCTACCGCGGCTAGTGACGGAGCAGGGATTGCCAGATTGGTCAGAATTCGAGGGCTGGATAAGTGTTCGGAGAAGAGTTATCCTGGAAGCTTCGTTGGTAGTGGGATCTTAA 1050 0.5133 MDWIRGPTLGSGSFATVSLATPKNPSLPFHIPVAVKSSDRFTSSLLVNEEHVLNRLGSSCPRIVKCLGHDTTVENGESFYNIFLEYASNGTLADQMKKNQGGMFDEKQVRRYVRSVMEGLKHIHENGFIHCDIKLHNMLVFEDGEVKISDFGLAKEKGAVQRGDKKWECRGTPLYMSPESVNDNEYESPADIWALGCAAVEMLTGKPAWNVKSGSNMWSLLIRIGVGEEIPVIPEDLSEQGKDFLRKCFVKDPRERWTAEMLVNHPFLADEDNHDALIHNEISPKSNFDFPDWDFTSTVTDSAVTTVLSPGDWLPRLVTEQGLPDWSEFEGWISVRRRVILEASLVVGS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00651 349 CDD STKc_MAPKKK 2 268 - -
Aip05g00651 349 Pfam Protein kinase domain 7 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00651 349 SMART serkin_6 3 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00651 349 Gene3D Transferase(Phosphotransferase) domain 1 3 303 - -
Aip05g00651 349 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 20 1 305 - -
Aip05g00651 349 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 305 - -
Aip05g00651 349 ProSitePatterns Protein kinases ATP-binding region signature. 9 36 IPR017441 GO:0005524
Aip05g00651 349 ProSitePatterns Serine/Threonine protein kinases active-site signature. 128 140 IPR008271 GO:0004672|GO:0006468
Aip05g00651 349 ProSiteProfiles Protein kinase domain profile. 3 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00651 349 SUPERFAMILY Protein kinase-like (PK-like) 3 313 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00651 Aip-Chr5 8215122 8216171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00651 1 336 MAP Kinase Kinase Kinase AT5G67080 53.582 1.05e-128 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Aip05g00651 Pkinase 1.2e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00651 - - aip:107641670 718.383