Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00648 ATGCCGGATCATTATTCAAGTGGTGGTGCCACAATGAACGACCAGCTCTCCAACCCAACCTCCATCTTCGGCCTACGCCTCTGGGTTGTTCTTGGCGTCTGCGTTGGCGCCTCCATTGTCCTCCTCTTATTCCTCATCTCCATTTGCCTCGCTTCCAAGCGCTCCAAGAAAACCACCACTATCACCACCACCACCACCACTACCACCACTTCATCTTCAATCCCTGTCCCTGATGTATCCAAGGAGATCCAAGAGATCAGAGTACTTGACCCCAATCCATTACCCGACCCTATTCCCGAACCGGAACCGGACGAAGAGAACCCCTCCGTGGTCTACAACAGAATCCAGTTTGAGATTGGGAAGAACCATAGAATCTCTTACCCTACTGAACAACGACCTTTCCTAAGGTCTTCTTCCCGTGAAGGCAGTGGTGAGGTTCCTACCGTGATCCCTGAGGTTTCTCACTTGGGTTGGGGCCACTGGTACACCCTCAGGGAGCTTGAGGATTCCACCAATGGGTTTGCGCCGGAGAATGTCATTGGCGAAGGTGGCTATGGAATTGTTTACCATGGTGTCTTGAAGGACAACACAAACGTTGCCGTTAAGAATTTGCTCAACAACAGGGGACAAGCAGAGAGAGAGTTTAAGGTTGAAGTGGAAGCTATAGGAAGAGTTCGGCACAAGAATCTAGTGAGGTTGCTCGGTTATTGTGCTGAAGGAGCACACAGAATGCTTGTGTATGAGTACGTTGACAATGGTAACTTGGAGCAGTGGCTGCACGGTGATGTTGGGTCTTGCAGCCCTCTAACTTGGGAAATTCGAATGAACATTATCCTTGGAACTGCAAAAGGATTAACTTATCTTCATGAGGGGCTGGAACCAAAAGTTGTTCACCGTGATATTAAATCAAGCAATATCTTGATCGATAAGCAGTGGAATTCCAAGGTTTCAGATTTTGGCCTTGCCAAGCTCCTTGGCTCTCAGAGCAGCTATGTCACCACCCGTGTCATGGGTACATTTGGATATGTAGCTCCTGAATATGCAAGTACTGGCATGTTGAATGAACGAAGCGATGTGTATAGTTTTGGAATTCTTATCATGGAAGTAATCACAGGGAGGAACCCGGTTGATTATAGCCGTCCGCCGGAAGAGGTGAATTTAGTTGATTGGCTCAAGAAGATGGTTAGTAACAGAAATCCAGAGGGAGTATTGGATCCTAAGCTTCCTGAGAAACCAACATTAAGGGCACTAAAAAGAGTCCTTCTTGTAGCTCTACGCTGCACAGACCCTAATGCACAAAAACGTCCTAAAATGGGGCATGTTATACACATGCTTGAGACTGAAGATTCCCTTAATTACAAAGAGGACCGGAGAGCTAGAAGGGATGCAGATCAGTCACCTAACCATAGAGCAGAGGATGGATTAAAAGTGAATGCAAATGTATCAGATGGTGACTGTAACAATGAAAATGGCACGTGTGGCCATGAGACAACAAAAAGCCACCAACTAGAAGAGCAATAA 1521 0.4688 MPDHYSSGGATMNDQLSNPTSIFGLRLWVVLGVCVGASIVLLLFLISICLASKRSKKTTTITTTTTTTTTSSSIPVPDVSKEIQEIRVLDPNPLPDPIPEPEPDEENPSVVYNRIQFEIGKNHRISYPTEQRPFLRSSSREGSGEVPTVIPEVSHLGWGHWYTLRELEDSTNGFAPENVIGEGGYGIVYHGVLKDNTNVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVDNGNLEQWLHGDVGSCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNILIDKQWNSKVSDFGLAKLLGSQSSYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEVITGRNPVDYSRPPEEVNLVDWLKKMVSNRNPEGVLDPKLPEKPTLRALKRVLLVALRCTDPNAQKRPKMGHVIHMLETEDSLNYKEDRRARRDADQSPNHRAEDGLKVNANVSDGDCNNENGTCGHETTKSHQLEEQ 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00648 506 Coils Coil 194 214 - -
Aip05g00648 506 MobiDBLite consensus disorder prediction 453 471 - -
Aip05g00648 506 PANTHER OS01G0323000 PROTEIN 9 487 - -
Aip05g00648 506 MobiDBLite consensus disorder prediction 453 506 - -
Aip05g00648 506 PANTHER RECEPTOR-LIKE KINASE PLANT 9 487 - -
Aip05g00648 506 MobiDBLite consensus disorder prediction 481 497 - -
Aip05g00648 506 Gene3D Phosphorylase Kinase; domain 1 154 249 - -
Aip05g00648 506 CDD STKc_IRAK 180 446 - -
Aip05g00648 506 SUPERFAMILY Protein kinase-like (PK-like) 158 447 IPR011009 -
Aip05g00648 506 Gene3D Transferase(Phosphotransferase) domain 1 250 463 - -
Aip05g00648 506 ProSiteProfiles Protein kinase domain profile. 174 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00648 506 ProSitePatterns Protein kinases ATP-binding region signature. 180 202 IPR017441 GO:0005524
Aip05g00648 506 ProSitePatterns Serine/Threonine protein kinases active-site signature. 296 308 IPR008271 GO:0004672|GO:0006468
Aip05g00648 506 Pfam Protein kinase domain 177 441 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00648 506 SMART serkin_6 174 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00648 Aip-Chr5 8170645 8173876 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00648 138 451 Trihelix Transcription Factor Family AT1G70460 45.625 2.91e-87 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Aip05g00648 Pkinase 5.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00648 - - gmx:100797726 775.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00648 05 8170645 8173876 Aip01g00955 01 18230952 18233446 ECH
Aip05g00648 05 8170645 8173876 Aip05g00648 05 8170645 8173876 ECH