Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00643 ATGGCTGATAATAAGCAACCAAACTTGAACGGAGCCTACTACGGACCAGCCATTCCACCGGCTGAGCCGCCTCGGCGCTACCGCCCTGACCGAAGCAGAAGAAGCTGCTTCTGCTGCCTATTCAGCGTCTTCTGGAAGATTCTTCTTGCGCTCATCGTGCTGGTCGTGATAGCAGGAGTCATATTCTACCTGGTGGTTCAGCCTCGCATATTCAAGTTCTACGTCAACGACGCAGAAATAACGCAATTCGATTACAACACCAACACCACCCAACTCCGCTACAACATGGTGCTCAACTTCACCGCCCACAACCCCAACAAGAAACTCGGCATCTACTACGATCAAGTGCTGGCCAAAGCCTTCTACGAGGACACCGACTTCGCCTCCGCCAACGTCATCACTTTCATGAACTCCTTCAGGCAAGACAAGAAGGGAACCAACCCTATGAGCGGTGTTTTCTCAGGTCAACAATTGATTTTCCTCGATTATAGCCAGTACACGCAGATCACTGATGATAAGAACCGTAGGAGTTTTGACATCTACGTCAAGCTCTACTTTCATATCAGGTTCAGGCTTGGGGATCTCATTTCTGGCACCTACAAGCCCAGAGTCAAGTGTGATCTCAAGGTTCCATTCATCAATGGCACCAATGCTTTCACCGTCTTTACGCCCACCAAGTGCGATATTGATTTCTGA 696 0.4943 MADNKQPNLNGAYYGPAIPPAEPPRRYRPDRSRRSCFCCLFSVFWKILLALIVLVVIAGVIFYLVVQPRIFKFYVNDAEITQFDYNTNTTQLRYNMVLNFTAHNPNKKLGIYYDQVLAKAFYEDTDFASANVITFMNSFRQDKKGTNPMSGVFSGQQLIFLDYSQYTQITDDKNRRSFDIYVKLYFHIRFRLGDLISGTYKPRVKCDLKVPFINGTNAFTVFTPTKCDIDF 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00643 231 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 23 229 - -
Aip05g00643 231 PANTHER OS05G0367900 PROTEIN 23 229 IPR044839 GO:0098542
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00643 Aip-Chr5 8016799 8017673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00643 65 220 SNARE and Associated Proteins AT1G32270 30.769 1.07e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00643 - - gmx:100795302 293.123