Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00642 ATGGCTGATAATAAGCAACCAAACTTGAACGGAGCCTACTACGGACCAGCCATTCCACCGGCTGAGCCGCCTCGGCGCTACCGCCCTGACCGAAGCAGAAGAAGCTGCTTCTGCTGCCTATTCAGCGTCTTCTGGAAGATTCTTCTTGCGCTCATCGTGCTGGTCGTGATAGCAGGAGTCATATTCTACCTGGTGGTTCAGCCTCGCATATTCAAGTTCTACGTCAACGACGCAGAAATAACGCAATTCGATTACAACACCAACACCACCCAACTCCGCTACAACATGGTGCTCAACTTCACCGCCCACAACCCCAACAAGAAACTCGGCATCTACTACGATCAAGTGCTGGCCAAAGCCTTCTACGAGGACACCGACTTCGCCTCCGCCAACGTCATCACTTTCATGAACTCCTTCAGGCAAGACAAGAAGGGAACCAACCCAtcggcttcctcggggcaacacccggagccccgacccgatgtccgagataaccatctccccccacgtggatag 516 0.4496 MADNKQPNLNGAYYGPAIPPAEPPRRYRPDRSRRSCFCCLFSVFWKILLALIVLVVIAGVIFYLVVQPRIFKFYVNDAEITQFDYNTNTTQLRYNMVLNFTAHNPNKKLGIYYDQVLAKAFYEDTDFASANVITFMNSFRQDKKGTNPSASSGQHPEPRPDVRDNHLPPRG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00642 171 PANTHER OS05G0367900 PROTEIN 23 150 IPR044839 GO:0098542
Aip05g00642 171 MobiDBLite consensus disorder prediction 143 171 - -
Aip05g00642 171 MobiDBLite consensus disorder prediction 157 171 - -
Aip05g00642 171 PANTHER LATE EMBRYOGENESIS ABUNDANT PROTEIN 23 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00642 Aip-Chr5 8015487 8016002 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00642 65 122 SNARE and Associated Proteins AT1G32270 37.931 9.93e-07 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00642 - - gmx:100795302 194.512