Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Aip05g00638 | ATGACTACTACTTCATCAATTTCTGGCACTGATAATAATAATGCCGTACTATTTTTCGAAAATGTTTCTTCCTCATTTGCTGGCCCTATGGATCACAGAGAGGCTTCTATCATGCTCCCAATTAACAATAATAACGCTGGTGCTGAAATAATTTACATCAGTGACGAAGAACCAGATCTTGAATCATCATTGTCAGATGTCAACATTAATTCTGCCCCTTCAATTTTATCAACAACGGAACAAACCAATCAACCTACCTCAAATCTTTTAACATTACAAAGAAATTTGAGAATCAACACCGCCAACAACAACCACCAACAAGATGGTGTGTCACTCGATTTATCCTTACACCAGTTTGGCGGTGATGGTGGTGGCAGCTTTTCTACTATTGATGTCACCGATGGCGGCACTGGTGGTGGTGGTGGAGGTGGAGATGGTCTCTTGATGAGGGTTTTCAACAATACTTCGACTAGGCGTATCATGCCTATGAAAAGAACTGCACCTGATTACGCTCACCGAGAGTTTACGGTGGGTGAGAGCTCAAGTGACGGTGGTGCTGGTGGTGGTTCTGTTGCTCAACCTATGGCAGCCCCCAAGCGCCGCCCCATCGCAAATGAAAATGAGGCTGTGCGCATTTCATCATCATCATCTAATACCTGCACTTGTACTCCTTCTCCCACTTGCCCTCTCCATGCTTCCACCAATAATAATATTTCTTCATCTTCCAGGGAACAACGCCATGAAACTGCTAACAACAACAACAACCCCCAAAATGTTGTTCGTGTTCCTTCTAGTTTGTCGCCAATTTCTGAGATGCAACGAGCTCTTCAGTCTGGTAGCTTTCAAGTCCTTCAACCTACTACTACTACTCCTCCTCCTCCTCCTAACAACAACAACAACAACGCAACACTTGGTATTCTGGAACTTGACGATGATTCCTTTATTTACCCGCAACCTGTTTTTGATAGTAGCCACCACCACCAAGTCCACCATGGCCATCAACGTTATTTCTCCTCTGCTGACACTTCTCCATTCCGCCCAGCCTCAATCAATTACATGGAAAATCTTCCTCATCATCAGTACGCCGGTTCTTCGTCTTCGTCTCCTTCCCCTCATCCTTGGAGCACCGTGATTAGGCCAAGGGCTATTCCCTCTCTGTCTCTCCCTCACCGAGTTGGAGGAAGTAATAGAGAATCTGACACCGGAAACAACTATCCTTCTGGAAGGGGAATAATCACTGTGACTCACAATCGTGGAAACTCATCATCATCAACACAGCTAGTGGAAAGCCTTGTACAAAACGCTGGTACCCCTTCTGCATTTCAGCACCTGTCGGACGCTGCTCTTGCATGGATTGGAAGGCTGAACTCTCATGACGCGACCTTGACGAGAATGTCATCATCTTCTACCACTGATAATACTCATCACAGGCCATTGCGAGCTTCTGCTATTGCTGAGGAGGCCTATAATTTGCCTACTTATTTTGCTGATGATTCAAGAAGGCTTAGAAGAGAGAGCCGCAATGCCATTCAACATCTGCCTAGTGGAGACTCCGTTCGAGAACTCGAGGAGCTTTTAATCCTTGATTACTCCAACTTGCTTGCCAGCATTGAGGAGGAGGAGGATGCGAATTTGCCGCAATATGAGCCTCTGGCAGACGGGCAGCGAGTGACGAACCCTGATTTAAGACTGACGGAAACTGAGGTTGCAGCATGTATTGGGCAGGAAATTTTCCAAACTGTTGGTCAGCAGCCTCAGAACATTGATGCATGCGGCATATGTCAGAAGGACTATGTTCACGGTGAAGAGCTTGGGAGATTGGATTGTGCGCACAGATATCACCTTTCTTGCATCAGGCAGTGGTTGCTCATCAAGAACAGATGCCCCGTTTGCAAGAAAATGGCTCTCACCATCATAGACTTGGAGGAtgacgaggaacatactatgagtttatga | 1956 | 0.455 | MTTTSSISGTDNNNAVLFFENVSSSFAGPMDHREASIMLPINNNNAGAEIIYISDEEPDLESSLSDVNINSAPSILSTTEQTNQPTSNLLTLQRNLRINTANNNHQQDGVSLDLSLHQFGGDGGGSFSTIDVTDGGTGGGGGGGDGLLMRVFNNTSTRRIMPMKRTAPDYAHREFTVGESSSDGGAGGGSVAQPMAAPKRRPIANENEAVRISSSSSNTCTCTPSPTCPLHASTNNNISSSSREQRHETANNNNNPQNVVRVPSSLSPISEMQRALQSGSFQVLQPTTTTPPPPPNNNNNNATLGILELDDDSFIYPQPVFDSSHHHQVHHGHQRYFSSADTSPFRPASINYMENLPHHQYAGSSSSSPSPHPWSTVIRPRAIPSLSLPHRVGGSNRESDTGNNYPSGRGIITVTHNRGNSSSSTQLVESLVQNAGTPSAFQHLSDAALAWIGRLNSHDATLTRMSSSSTTDNTHHRPLRASAIAEEAYNLPTYFADDSRRLRRESRNAIQHLPSGDSVRELEELLILDYSNLLASIEEEEDANLPQYEPLADGQRVTNPDLRLTETEVAACIGQEIFQTVGQQPQNIDACGICQKDYVHGEELGRLDCAHRYHLSCIRQWLLIKNRCPVCKKMALTIIDLEDDEEHTMSL | 651 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Aip05g00638 | 651 | SMART | ring_2 | 591 | 631 | IPR001841 | - | |
Aip05g00638 | 651 | MobiDBLite | consensus disorder prediction | 284 | 304 | - | - | |
Aip05g00638 | 651 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE HIP1-RELATED | 216 | 636 | - | - | |
Aip05g00638 | 651 | Pfam | Ring finger domain | 590 | 632 | IPR001841 | - | |
Aip05g00638 | 651 | ProSiteProfiles | Zinc finger RING-type profile. | 591 | 632 | IPR001841 | - | |
Aip05g00638 | 651 | MobiDBLite | consensus disorder prediction | 208 | 262 | - | - | |
Aip05g00638 | 651 | MobiDBLite | consensus disorder prediction | 392 | 406 | - | - | |
Aip05g00638 | 651 | SUPERFAMILY | RING/U-box | 590 | 641 | - | - | |
Aip05g00638 | 651 | MobiDBLite | consensus disorder prediction | 177 | 262 | - | - | |
Aip05g00638 | 651 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE RNF165 | 216 | 636 | IPR045191 | GO:0061630 | |
Aip05g00638 | 651 | MobiDBLite | consensus disorder prediction | 386 | 406 | - | - | |
Aip05g00638 | 651 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 574 | 636 | IPR013083 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Aip05g00638 | Aip-Chr5 | 7919843 | 7923473 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Aip05g00638 | 505 | 636 | C3H Transcription Factor Family | AT2G15530 | 31.250 | 2.32e-18 | 87.4 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Aip05g00638 | - | - | aip:107640059 | 1212.59 |