Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00629 ATGCCTGCTTCAACGGTGGAGGAGGAGATTCAGTTAACTCCATGGGATCTCCAACTCCTCCTAGTTGATCCCATTCAAAAGGGCCTCCTCTACCGTAACGACCCGGTCACTCCACCGATCATAATCCAACACCTCAAACATTCCCTTTCATCCACCCTTTCTTTCTTCCCACCGCTTGCGGGCCGCCTTTCCGTTACGGAACATGACGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCATTGTTTGTCCATGCAGTTGCGGATGACTACTCCGTTAACGATATCGTTAGTTCCGTTTACACTCCACGCTTTGTGCACTCTTTGTTCCCGCTCAACAGGGTTAGAAACCACGAAGGAACAACCAAGCCGTTGTTGGCGGTTCAAGTCACGGAGCTCAACGACGGTTACTTCATCGGGTGCACCATGAACCACGTTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCTGAGATCTCACGTGGTTCGGAAAAATTGTCCAAGCCTCCCGTGCTTGAACGCTGGTTCCTTGACAGCGGCCATGGCTGCTCCGCGTCTGCCATACGGGTTCCTTTGACGAAGGAGAAGATGATCCAAAGTGGTTACTACGGTTTCGTCTCAGAACTGCAACGCGAGAGAGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGACAAAAGCCAAGGCAGAACTTGAAGGCGAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTCGGAACCAGGGTCTTGAGCCCGAAGAAGAGGTGAATTACAGGTTGCTGATAGGTGGTAGGGGGAGAATGAAGAGTCCGGCATTGGCGGAAAACTATTTTGGGAATGCGGTGCAGGACGGAACAGTGAGCATGAAGGTTAAAGAGCTTCTAGAAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAGAAAGATAGTTGATTTGCACACGGAGGAGAAGATGAAGAGTTATTATAGGGGTTGGGTGAAGAACCCTAGGCTTCTGACGGAGGGAGGCATGGCTGGCAATGCTTTAGTGACAAGCAGTTCGCCAAGGTTTGATGTTTATGGGAATGATTTCGGGTGGGGGAAACCGGTGGCGGTGAGAAGCGGAGCCGGGAACAAGAGCCATGGTAAGATAACGGTTTTTGCTGGGGCGGAAGATGGTGTTGACATTGAGGTTTGTCTTTCCTATGAGATATTGGAAGCTATGGGTAATGACTGTGAATTCATGGATGCCGCCTCGCTCCGCCGCCTAATAACAAATTGA 1314 0.4992 MPASTVEEEIQLTPWDLQLLLVDPIQKGLLYRNDPVTPPIIIQHLKHSLSSTLSFFPPLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADDYSVNDIVSSVYTPRFVHSLFPLNRVRNHEGTTKPLLAVQVTELNDGYFIGCTMNHVVGDGTSFWHFMNSWAEISRGSEKLSKPPVLERWFLDSGHGCSASAIRVPLTKEKMIQSGYYGFVSELQRERVFHFSKDKIAELKTKAKAELEGESKNKISSLQALLTHLWRSVVRNQGLEPEEEVNYRLLIGGRGRMKSPALAENYFGNAVQDGTVSMKVKELLEGGLGKGALEMRKIVDLHTEEKMKSYYRGWVKNPRLLTEGGMAGNALVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKSHGKITVFAGAEDGVDIEVCLSYEILEAMGNDCEFMDAASLRRLITN 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00629 437 Pfam Transferase family 5 426 - -
Aip05g00629 437 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 7 428 - -
Aip05g00629 437 Gene3D - 1 205 IPR023213 -
Aip05g00629 437 Gene3D - 214 421 IPR023213 -
Aip05g00629 437 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00629 Aip-Chr5 7820415 7821880 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00629 43 386 Monolignol Biosynthesis Gene Families AT5G48930 29.444 1.59e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00629 - - pvy:116114536 487.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00629 05 7820415 7821880 Aip05g00629 05 7820415 7821880 ECH