Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00628 ATGACAAGTGTTAAAGTGATTTCAACAAGCACAATCCATGTAGCAAACAAGGATTCAACGGTGGAGGAGGAGATTCAGTTAACTCCATGGGATCTCCAATTCCTCCTATTTGATCCCATTCAAAAAGGTCTTCTCTTCCGTAACAACCCCATCACTACTCCACCAATCATAATCCAACACCTCAAACATTCCCTTTCCTCCACCCTTTCTTTCTTCCCACTCCTCGCGGGCCGCCTTTCCGTTACGGAACACGATGACAACACTTCCTCCGTTTCCGTTATTTGCAACAACTCCGGAGCGCTGTTTGTCCATGCCGTTGCGGATAAATACTCCGTTAATGATATCGTTAGTTCCGTTTACACTCCACGCTTTGTGCACTCTTTGTTCCCGCTCAACAGGGTTAGAAACCACGAAGGAATAACCAAGCCGTTGTTGGCGGTTCAAGTCACCGAGCTCAACGACGGTTTCTTCGTTGGGTGCGCCATGAACCACGTTGTTGGAGACGGAACTTCCTTTTGGCATTTCATGAACTCTTGGGCCGAGATCTCACGTGGTTCGGAAGAATTGTCCAAGCCTCCCCTGCTTGAACGCTGGTTCCTTGACAGCTCCGCCTCTGCCATACGCGTTCCTTTGACGAAGGAGAAGATGATACAAAGTGGTTACGACGGTTTCGTCCCAGAACCTCAATGCGAGAGGGTTTTCCATTTCAGTAAAGACAAGATCGCTGAACTCAAGGCAAAAGCCAACGCAGAAATTGAAGGCGAAAGCAAAAACAAAATATCTTCGCTGCAAGCGCTTTTGACTCACCTGTGGAGATCCGTGGTTGGGAGCCAGGGTCTTGAGCCCGAAGAAGAAGTGAATTACAGCTTGACGATGGGGGGCAGGGGGAGAATGAAGAGTCCGGCAGTGGCGGAAAACTATTTTGGGAATGCGGTGCAGGTTGGAATAGTGCGCATGAAGGTTAAAGAGCTTCTAGAAGGAGGGCTTGGAAAGGGTGCGTTGGAGATGAACAAGATAGTTGGTTTGCACACGGAGGAGAAGATGAAGAGCTACTATAGGGGTTGGGCGGAGAACCCTAGGCTTCTGACGATGCGAAGTTTGGGGGGAAACAATACTTTAGTGACAAGCAGTTCGCCGAGGTTTGATGTTTATGGGAATGATTTTGGGTGGGGGAAACCGGTGGCAGTGAGGAGCGGAGCCGGGAACAAGATCCCTGGCACCATAACGGTTTATGCTGGGGCGGAAGATGGTGTTGACTTTGAAGTTTGTCTTTCATATGAGATATTGGAGGCTATGGGTAATTACCCTGACTTCATGGACGCCTTCTCCGATCCGCCACCTAATAATAACAAACTTTTTCTACCAAATTAG 1371 0.4865 MTSVKVISTSTIHVANKDSTVEEEIQLTPWDLQFLLFDPIQKGLLFRNNPITTPPIIIQHLKHSLSSTLSFFPLLAGRLSVTEHDDNTSSVSVICNNSGALFVHAVADKYSVNDIVSSVYTPRFVHSLFPLNRVRNHEGITKPLLAVQVTELNDGFFVGCAMNHVVGDGTSFWHFMNSWAEISRGSEELSKPPLLERWFLDSSASAIRVPLTKEKMIQSGYDGFVPEPQCERVFHFSKDKIAELKAKANAEIEGESKNKISSLQALLTHLWRSVVGSQGLEPEEEVNYSLTMGGRGRMKSPAVAENYFGNAVQVGIVRMKVKELLEGGLGKGALEMNKIVGLHTEEKMKSYYRGWAENPRLLTMRSLGGNNTLVTSSSPRFDVYGNDFGWGKPVAVRSGAGNKIPGTITVYAGAEDGVDFEVCLSYEILEAMGNYPDFMDAFSDPPPNNNKLFLPN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00628 456 Pfam Transferase family 3 432 - -
Aip05g00628 456 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 3 441 - -
Aip05g00628 456 Gene3D - 219 434 IPR023213 -
Aip05g00628 456 Gene3D - 1 218 IPR023213 -
Aip05g00628 456 PANTHER ANTHRANILATE N-HYDROXYCINNAMOYL/BENZOYLTRANSFERASE-LIKE PROTEIN 3 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00628 Aip-Chr5 7759654 7761233 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00628 59 400 Monolignol Biosynthesis Gene Families AT5G48930 28.926 4.89e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00628 - - pvy:116114536 476.478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00628 05 7759654 7761233 Aip05g00628 05 7759654 7761233 ECH