Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00602 ATGACTTACTTTTTTTCTGATGGAGACGATGATGCCCTTAGCTCCCGCAAAGTTCGGGATGAGGTTTTTCGGCCCGAGGGGCCGGTGCCCGACCCCCAACCTAAACCCCAGCCTAGACACAGTGCTATCGGTGAGGTTGACCATGATAAGGGGTTCCAATCATTGGCCTTCACAGTCCCAGATAATTTCTTCATCAATTGTGGCTCGGACACCGATGTTACAGACAACAATACTGGTCGAATTTTCATTGGAGAAAGAGAAACAGAAATGGAAGCATCTTCTTCTGTTGGTTTCATCTTCCCAAAACATGGTAGCAGCAGCGAGAAAGAGAGCAACCATTCACCAACACCTCCTCTGTATCAAACAGCAAGGCTTTTCCATGCTGAATCTGAATACAAGTTCAGAATTGAAAAGCATGGGTATCATCTTCTGCGCCTCCATTTCTTTGCTTTCTCTTCTTCGGAAGGTAACCTCTCCTCTTCTCTCTTCAATGTCTCTGTTCCCGGGTTCTTCCTTTTGAACAATTTCAATCCTCAATACAACAAAACCTTAATAGAGGAGTTCTTTTTGAGCATCAACACCAACAACTTCCGAATCACTTTCTCTCCTATTCATCCAAATCCTGCATTTCTAAATGCGATAGAACTCTTCCTTCTCCCCAATACTTTCATCCCAAAAGGAAGATTTTATGACTACAATAGCATGGTGTTCCATACGAGTCACAGGCTCAACGTTGGAGGCTCTGATATCAACATGGTGAATGACTCGTTGTGGAGAAACTGGCAAATTGATGATCATCCTTCTGCTGGACACAAATTTCAAAATACTAGTCCAATTCACGAAGGAAACTATGCTACTCTTGCCCCAAGTCTTGTTTACCAGAGCGCAAGAGTGATGAATAGTTCAAAGAATCACTCAAAACTTTCCAATATAACATGGCAACTTGATGTCAAGAAAAATGCTAAGTATCTTGTTCAGCTTGATTTCTGTCATATTATTGGAACTCCGGTTCTGAAAAATTCACACTTCAATGTTTACTTCGATAATAACTTGAGTCACCGGATCACTCCTTATGATCACTTCAACAAAACTTGTGTTCCTTTTCGTTTGGAATCTGTGGTTGATTCGGATGACTCTGGAGTTTTCAAAATCAGCATAGGACCTGCCCAGAATTCTCCACATAAATATGCTTATCTGAATGGCCTGGAGCTAATGGAAATCATTGAGAAAACAAGTCCAGGTCCTATGCCAGAAGTAAAACAGAATCATCCTTCGCATTCTCATTCCCATTGGTATTGCCATTTGCTTGTGCATTTGAAACTGTTGGCAATTCTCGGAGCTGTGGCTTTGGTTTCAGTTATAGCAGTTGTGTTCTTTGTGTGTCTGAAACCCAAGAAACCAAAGCATGATCAAAGTGTTGATTGGTTGCCAATGGAGAAAAAAAGAGGAGGAGGAAGCTCACACTCTCATAGCAGATATGGTAGCAGCCATGGCTCATCATCATCATCATCTTCACGTTCACATGTCCCAAACTTAAACAAGATCCCTTTCGATGAACTCCAAGTTGCTACCAACAACTTCGACCAGAATTGGGTAATTGGAAAGGGTTGTTTTGGAATTGTATACAAAGGACTTCTCAACAATGGACTGAGGGTGGCAGTGAAAAGAACAGAACCAGGGTTACTACAACAACAAGACCTCTTGGATTTGGAAGCGGAGATCAATATTCTGTTGAGAATTCGCCATCGCCACCTTGTTTCCTTGATCGGATATTGCAACGAGAAGTCAGAGATGATCCTTGTTTATGAGTACATGGAGAAAGGGACACTGAGGGATCATTTATACAGTTCCAAGTTGTGTTGGATTCAGAGGCTTGAGATTTGCATTGGAGCCGCCAGAGGACTGAATTACCTTCACAAAGGTTCTTCCTGCAGAGGAATCAGCAATGTTCATAGCCATGTGAAATCTAGTAACATATTGTTAGATGAGAATAATGTGGCTAAGTTTTCTGATTTTGGGCTTTCAAGAAAAGTAGGCCCTTTTGATGAGAACATGAAATGTGATGTGTATTCCTTTGGAATAGTACTTGTTGAGGTGGTGTGTGGAAGGGTGGCTATGGATGCAAAGTACTTGGCTGCTGAATGGGGAAGCATTTGCAAGAAGAAAGGGAGATTGGAAGAAATAGTTGATCCTTGCATAAAGTGTGAAATAGATGGAGAGTCTCTCACAAAGTTTGGTGAGACTGTAGACAAGTGTTTGAGAAAGAAGGCTTTTGATAGGCCTTGTATGGGTGATGTCTTGTGGGACTTGGAGTATGCATTGCAGCTTCAGAGAGGGGCAATTCAGTCAAAGCCACATAGTCTTAATAATACTAATACTATTGCTTCTTCTAAGACTCAAGAATTGGCCATTCTCAAGCATGATCAATTGAATTCACCAGTCAACTATTATTCTGGTTTGTAA 2463 0.4162 MTYFFSDGDDDALSSRKVRDEVFRPEGPVPDPQPKPQPRHSAIGEVDHDKGFQSLAFTVPDNFFINCGSDTDVTDNNTGRIFIGERETEMEASSSVGFIFPKHGSSSEKESNHSPTPPLYQTARLFHAESEYKFRIEKHGYHLLRLHFFAFSSSEGNLSSSLFNVSVPGFFLLNNFNPQYNKTLIEEFFLSINTNNFRITFSPIHPNPAFLNAIELFLLPNTFIPKGRFYDYNSMVFHTSHRLNVGGSDINMVNDSLWRNWQIDDHPSAGHKFQNTSPIHEGNYATLAPSLVYQSARVMNSSKNHSKLSNITWQLDVKKNAKYLVQLDFCHIIGTPVLKNSHFNVYFDNNLSHRITPYDHFNKTCVPFRLESVVDSDDSGVFKISIGPAQNSPHKYAYLNGLELMEIIEKTSPGPMPEVKQNHPSHSHSHWYCHLLVHLKLLAILGAVALVSVIAVVFFVCLKPKKPKHDQSVDWLPMEKKRGGGSSHSHSRYGSSHGSSSSSSSRSHVPNLNKIPFDELQVATNNFDQNWVIGKGCFGIVYKGLLNNGLRVAVKRTEPGLLQQQDLLDLEAEINILLRIRHRHLVSLIGYCNEKSEMILVYEYMEKGTLRDHLYSSKLCWIQRLEICIGAARGLNYLHKGSSCRGISNVHSHVKSSNILLDENNVAKFSDFGLSRKVGPFDENMKCDVYSFGIVLVEVVCGRVAMDAKYLAAEWGSICKKKGRLEEIVDPCIKCEIDGESLTKFGETVDKCLRKKAFDRPCMGDVLWDLEYALQLQRGAIQSKPHSLNNTNTIASSKTQELAILKHDQLNSPVNYYSGL 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00602 820 ProSitePatterns Protein kinases ATP-binding region signature. 533 555 IPR017441 GO:0005524
Aip05g00602 820 Gene3D Transferase(Phosphotransferase) domain 1 605 683 - -
Aip05g00602 820 SUPERFAMILY Protein kinase-like (PK-like) 495 770 IPR011009 -
Aip05g00602 820 MobiDBLite consensus disorder prediction 468 509 - -
Aip05g00602 820 Gene3D - 62 218 - -
Aip05g00602 820 Gene3D - 237 407 - -
Aip05g00602 820 Gene3D Transferase(Phosphotransferase) domain 1 684 796 - -
Aip05g00602 820 PANTHER BNAC03G27170D PROTEIN 55 798 - -
Aip05g00602 820 Pfam Protein tyrosine and serine/threonine kinase 532 678 IPR001245 GO:0004672|GO:0006468
Aip05g00602 820 MobiDBLite consensus disorder prediction 468 486 - -
Aip05g00602 820 PANTHER OS07G0166700 PROTEIN 55 798 IPR045272 GO:0004714|GO:0006468
Aip05g00602 820 MobiDBLite consensus disorder prediction 10 26 - -
Aip05g00602 820 Pfam Malectin-like domain 65 406 IPR024788 -
Aip05g00602 820 ProSiteProfiles Protein kinase domain profile. 527 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00602 820 MobiDBLite consensus disorder prediction 488 509 - -
Aip05g00602 820 MobiDBLite consensus disorder prediction 1 44 - -
Aip05g00602 820 Gene3D Phosphorylase Kinase; domain 1 488 604 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00602 Aip-Chr5 7361953 7365041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00602 56 791 Receptor kinase-like Gene Family AT2G23200 37.262 2.97e-143 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Aip05g00602 Malectin_like 5.5e-29 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00602 - - aip:107642740 1520.37