Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00594 ATGCCACCCCAACAACCCCTCCTGGAGCCAGAAGAGGACACGGCCTACGACTCCTCCGAGAAGGTGGTGGTGGCGGTGGGAGTGGAGGATGAGTATGGCGATGACGTGGAGGCGCCGCCCTTCTCGTGGAAGAAACTGTGGCTGTTCACTGGGCCGGGGTTCTTGATGAGCATAGCGTTTCTTGACCCAGGGAACTTGGAGGGGGATCTTCAGTCGGGTGCGATTGCAGGATACTCGCTGCTCTGGCTGCTCATGTGGGCCACCCTAATGGGCCTTCTGATTCAGCTGCTTTCGGCCAGGCTCGGGGTGGCCACAGGGCGGCACCTGGCTGAGCTGTGCAGGGAGGAGTACCCGCCATGGGCCAGGATTGTGCTGTGGCTCATGACTGAGTTGGCTCTTATTGGCTCCGACATACAAGAGGTTATTGGCAGCGCTATTGCTATCCGGATTCTCAGTAACGGATTTGTTCCTCTATGGGCTGGTGTCGTCATTACTGCTCTTGATTGTTTTATTTTTCTATTTCTCGAGAACTATGGTGTGAGGAAATTGGAGGCATTTTTTGCTGTTCTGATTGGCATAATGGCGCTCTCATTTGCATGGATGTTCGGTGAAGCAAAACCCAATGGGGTTGATGTTCTTCTTGGTGTTTTGGTTCCTAAACTTAGCTCCAGAACTATAAAGCAAGCTGTTGGAGTTGTTGGTTGCATCATTATGCCTCACAACGTGTTCTTGCATTCCGCTCTCGTTCAGTCAAGGCAGATTGATCAAAGCAAGAAAGGCCGCGTTCAAGAAGCTCTTAATTACTACTCCATAGAGTCCACCTTGGCCCTTGCAGTCTCTTTCATCATCAATATTTTCGTCACGACTGTGTTTGCCAAGGGCTTTTACGGTACTGAAATAGCCGATAGTATTGGTCTTGTAAATGCAGGGACTTATCTTCAGGAGAAGTATGGGGGTGGATTATTCCCAATCCTATATATATGGGGCATTGGTTTGTTAGCAGCAGGGCAAAGTAGCACCATAACTGGTACATATGCTGGTCAATTCATCATGGGAGGTTTTCTCAATTTAAGGCTGAAGAAATGGGTGAGGGCGTTAATTACCCGAAGCTGCGCAATCATCCCAACCATGATAGTCGCTCTTATCTTTGATACCTCGGAGGAATCTTTAGATATCCTGAATGAATGGCTTAATGTTCTTCAGTCAGTTCAAATCCCATTTGCTCTTATTCCCTTGCTTTGCTTGGTGTCCAAGGAACAGATAATGGGCACTTTCAGAATTGGTCCTGTCCTCAAGATTTTTTCTTGGCTGGTGGCTGCTCTGGTGATAGTGATCAATGGCTATCTTTTGCTAGACTTCTTCTCCTCTGAAGTGAATGGAGCAGTGTTTGCCGTTGTAGTGTGTGCACTAACAGCTGCTTATGTTGCATTTGTAATATACCTTATTGCGCGTGCTGTTTCCTTTTCGCCTTGGCAAAGTTTAGATCGATCATAG 1494 0.4799 MPPQQPLLEPEEDTAYDSSEKVVVAVGVEDEYGDDVEAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQSGAIAGYSLLWLLMWATLMGLLIQLLSARLGVATGRHLAELCREEYPPWARIVLWLMTELALIGSDIQEVIGSAIAIRILSNGFVPLWAGVVITALDCFIFLFLENYGVRKLEAFFAVLIGIMALSFAWMFGEAKPNGVDVLLGVLVPKLSSRTIKQAVGVVGCIIMPHNVFLHSALVQSRQIDQSKKGRVQEALNYYSIESTLALAVSFIINIFVTTVFAKGFYGTEIADSIGLVNAGTYLQEKYGGGLFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWVRALITRSCAIIPTMIVALIFDTSEESLDILNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFRIGPVLKIFSWLVAALVIVINGYLLLDFFSSEVNGAVFAVVVCALTAAYVAFVIYLIARAVSFSPWQSLDRS 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00594 497 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 9 497 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 Pfam Natural resistance-associated macrophage protein 67 428 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 TIGRFAM nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 44 422 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 125 151 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 155 174 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 180 201 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 229 252 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 336 355 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 364 381 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PRINTS Natural resistance-associated macrophage protein signature 398 417 IPR001046 GO:0016020|GO:0030001|GO:0046873
Aip05g00594 497 PANTHER METAL TRANSPORTER NRAMP3 PROTEIN 9 497 - -
Aip05g00594 497 Hamap Divalent metal cation transporter MntH [mntH]. 33 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00594 Aip-Chr5 7212510 7215677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00594 28 491 Inorganic Solute Cotransporters AT2G23150 79.406 0.0 780
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00594 K21398 - gmx:100789871 888.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00594 05 7212510 7215677 Aip05g00594 05 7212510 7215677 ECH
Aip05g00594 05 7212510 7215677 Aip01g01042 01 22063706 22067636 PCT