Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00585 ATGGTGTATCTCGCCGGGTACAGCACGGTCATAGGATTCCATCACCGGAGCCCAATTTCTTTGATATCGATAACACAAAACGGCGCCACTATAACGCCCTACGACGTCGTATTTCTGTGTCGTTGTTGCAGATACCATCGGTTCAGTAGTGCATCTGAATCTTCTTGGGAAGAATTCCCCGCGGAGAACGCGTACGAGCTGCTAGGAGTGTCGGAGACCAGCTCCTTCGCTGAGATCAAAGCGTCGTTTCACAAATTAGCGAAAGAGACTCACCCGGACCTTGCTGAGTCAAGGAACGATTCCGCTGAGTCTCGCCGATTCGTGCAAATCCTGGCTGCATATGAGATTCTTTCAGATTCTCGGAAGAGAACCCATTATGACATGTATTTGTTGTCCCAGAGAAGGCTCATACAGAGGCATTCCCAACAGGGTTCAAAATTGCACATTTACAAATCCCATGCTAATACTTTCAAGGAGATGGAAGTTGTTGAATGGTTGAAGTGGTACAGATTAACTATAAATGATATTTTGTCAGAGAAGAAGGTGGCTGTTGGAACAGGCTACTTTGATGTGCTTGAGAGAGATTTCTATTCAGCTATTCATGCAGCATATTATGGTCCTGAAATTGATTCTATGCCTATGGAGCTTTTTCCTGACTGCTTTGAGGCTGAGGAAAGGTCCTCTCATGAAACTCCTGAGGTTTTGCACTTGGTTTCCGGCCGGGATCTTTTCGGGATGGTTTGCCTAGTTGAGAAGATTCCGGAGATATCATCTACGAAAAATGAGAAGTTAATTTCTTTCAGATCCTTAGATTCTGACCTGTGCCAATCTACGATGAAGAAATTTCACATCAATGCAGAAAGGCAAGAGGATTTTGGGACACATCGAATTCAAACTTCTAACATTTCAAATAGTGTATCGGATGCATATAGAGATCTAGAATTGCACGTCTCCGGCAGAGTGATTGCTACAGCAACCCGGGACCTACCTAGATGTTATTCTGGTGGGTTGCAGAAAGATGTTGAAGATCACATTCACGTTTTCCTTAATTCGGATGAAGATCCAAAATATATCAGTGGCGACTTTCCAGAACATTACTTGGCCAATGGTGCAGTTGGAAGCAGAATTCATTTGGGAACCATATCTGGAATTGGGAGCACCCCAGATGAAGGTTGTTGTTATGTCTACAACAGCAATGGTGACAAGACCCATGCAATCATGAAACATAGAACATTGCTGGTGAAGCATATGCACTGGTATGAAATCGGTGACAGAGTTTCACTTTGTGAGTGTAGATGCACTAGGGCACGTTTACCACCAAGCAATTATACAGGTTTTGGCTATTTGAACCTCGCTCTGGCTTCCATGACATAG 1374 0.4403 MVYLAGYSTVIGFHHRSPISLISITQNGATITPYDVVFLCRCCRYHRFSSASESSWEEFPAENAYELLGVSETSSFAEIKASFHKLAKETHPDLAESRNDSAESRRFVQILAAYEILSDSRKRTHYDMYLLSQRRLIQRHSQQGSKLHIYKSHANTFKEMEVVEWLKWYRLTINDILSEKKVAVGTGYFDVLERDFYSAIHAAYYGPEIDSMPMELFPDCFEAEERSSHETPEVLHLVSGRDLFGMVCLVEKIPEISSTKNEKLISFRSLDSDLCQSTMKKFHINAERQEDFGTHRIQTSNISNSVSDAYRDLELHVSGRVIATATRDLPRCYSGGLQKDVEDHIHVFLNSDEDPKYISGDFPEHYLANGAVGSRIHLGTISGIGSTPDEGCCYVYNSNGDKTHAIMKHRTLLVKHMHWYEIGDRVSLCECRCTRARLPPSNYTGFGYLNLALASMT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00585 457 SUPERFAMILY Chaperone J-domain 62 133 IPR036869 -
Aip05g00585 457 CDD DnaJ 63 119 IPR001623 -
Aip05g00585 457 Gene3D DnaJ domain 53 152 IPR036869 -
Aip05g00585 457 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Aip05g00585 457 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 34 443 - -
Aip05g00585 457 Pfam DnaJ domain 63 127 IPR001623 -
Aip05g00585 457 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Aip05g00585 457 SMART dnaj_3 62 122 IPR001623 -
Aip05g00585 457 PRINTS DnaJ domain signature 65 83 IPR001623 -
Aip05g00585 457 PRINTS DnaJ domain signature 83 98 IPR001623 -
Aip05g00585 457 PRINTS DnaJ domain signature 102 122 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00585 Aip-Chr5 7094208 7098173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00585 65 127 C2H2 Transcription Factor Family AT1G74250 39.394 3.79e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00585 - - gmx:100805332 668.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00585 05 7094208 7098173 Aip05g00585 05 7094208 7098173 ECH