Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00577 ATGTCCCAGCTTAATAATGTTCTACTTGTGTGGTTTCTCTTATTAAGTGTTGCACATGGTACTTCAGCTCAGCTAAGTCGACACCATTATGCAAAAATCTGCCCCAATGTTGAGAACATAGTCAGAGATGCAGTTAAGAAGAAGTTCCATGAAACATTTGTCACTGTCCCTGCTACCATTCGCCTCTTCTTCCATGATTGCTTTGTGAGGGGTTGTGATGCTTCAGTTTTGGTAGCTTCGACTCCAAACAACAAAGCAGAGAAGGATCATCCTGACAATCTCTCACTGGCCGGAGACGGCTTTGACACGGTGATCAGAGCAAAAGCAGCCGTGGATGCTGTCCCTCTCTGCAGAAATAAAGTCTCATGCGCAGATATTCTTACCATGGCAACCCGTGATGTTATTTCACTGGCTGGTGGACCGTACTATGAGGTAGAGTTAGGGAGATATGATGGGTTGAAGTCAAGGGCTTCAGATGTGAATGGGAAGCTGCCGCAGCCAGGGTTCAACTTGAACCAGCTCAATTCACTCTTCGCCGCAAACGGCCTTACCCAGACAGATATGATTGCTCTTTCAGGGGCTCACACCGTGGGGTTCTCTCATTGCAACAAGTTCAATAACAGAATCTACAATTTCAAGAGCCACACTAAAGTGGACCCCACACTCAACGACCTTTACGCCTCGCAGCTAAAATCTATGTGCCCGAGAAATGTGGATCCAAGGATTGCAATCGACATGGACCCAACAACACCACGGGCTTTCGATAACGCTTATTTCAAGAATCTTCAGAAGGGTATGGGCCTGTTCACCTCAGACCAAGTTCTGTTCATGGACCCAAGGTCCAAGCCTGCTGTGGAGGCTTTTGCTAGTAACAGCAAAACCTTCCACGCCAACTTCGTCGCTGCCATTACCAAGTTGGGCCGAGTTGGAATCAAGAATGCGCAAAATGGGAACATTCGTTCAGATTGCTCCATCATATGA 981 0.4709 MSQLNNVLLVWFLLLSVAHGTSAQLSRHHYAKICPNVENIVRDAVKKKFHETFVTVPATIRLFFHDCFVRGCDASVLVASTPNNKAEKDHPDNLSLAGDGFDTVIRAKAAVDAVPLCRNKVSCADILTMATRDVISLAGGPYYEVELGRYDGLKSRASDVNGKLPQPGFNLNQLNSLFAANGLTQTDMIALSGAHTVGFSHCNKFNNRIYNFKSHTKVDPTLNDLYASQLKSMCPRNVDPRIAIDMDPTTPRAFDNAYFKNLQKGMGLFTSDQVLFMDPRSKPAVEAFASNSKTFHANFVAAITKLGRVGIKNAQNGNIRSDCSII 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00577 326 Gene3D - 29 325 - -
Aip05g00577 326 Pfam Peroxidase 41 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 245 260 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 261 278 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Plant peroxidase signature 301 314 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Aip05g00577 326 PANTHER PEROXIDASE 6 326 - -
Aip05g00577 326 CDD secretory_peroxidase 24 324 IPR033905 GO:0004601|GO:0042744
Aip05g00577 326 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Aip05g00577 326 ProSiteProfiles Plant heme peroxidase family profile. 24 326 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PANTHER - 6 326 IPR000823 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 Gene3D Peroxidase, domain 2 165 306 - -
Aip05g00577 326 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Aip05g00577 326 PRINTS Haem peroxidase superfamily signature 247 262 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00577 Aip-Chr5 6966548 6972661 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00577 1 323 Peroxidase AT3G49960 66.462 6.02e-159 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00577 K00430 - gmx:100804350 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00577 05 6966548 6972661 Aip05g00577 05 6966548 6972661 ECH
Aip05g00577 05 6966548 6972661 Aip01g03302 01 136132215 136134707 PCT
Aip01g01086 01 23806170 23810002 Aip05g00577 05 6966548 6972661 PCT