Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00572 ATGGCCATAAGGCCCTTCCAATTCCAATCTTCCACCTTCTCCCGCGACACTTTCCTTTCTCTTTTCCGCACTTACCACCATCTTCATCTTCCTTCTTCTTCTTCCTCCTCTTTCCCCACTCTCCCCTCCATTTTCCTCCTCCGCAGCTTCGCCGCCTCCGCGCCATCTTCATTCTCTCGCCGCAACCGCTCTCATCCTCCTCCTCCTCCACCACCACCACCACCTGACACCCTGGCGCAGAAGATTGGAAAGTCCACTCGCCGCCCCGGCGCCACCTCCAAGGCCAGGATTTATGCCGATATCAACGTCGTCCGTCCCAAGGAATATTGGGACTATGAAAATCTCACCGTCCAGTGGGGGGAGCAAGATGACTACGAGGTTGTGAGGAAGGTGGGAAGAGGGAAATACAGTGAGGTCTTCGAGGGCGTTCACTCCACCGATAATGAAAAATGCATCATCAAGATCCTCAAACCCGTCAAGAAGAAAAAGATAAAGAGGGAGATCAAAATATTGCAAAATCTCTGTGGAGGTCCCAATGTTATAAAGCTGCTTGACATTGTTAGGGACCAGCAATCAAAGACCCCAAGCCTTATATTTGAATATGTCAATAACACTGATTTTAAAGTGCTCTACCCCACCCTGTCAGATTATGATATCCGATATTATATCTATGAACTTCTAAAGGCACTGGATTATTGCCACTCTCAAGGAATCATGCATCGGGATGTAAAGCCGCATAATGTAATGATTGATCATGAGCAGCGGAAGCTTCGCCTAATAGATTGGGGGCTTGCAGAGTTTTATCATCCTGGGAAAGAATATAATGTCCGCGTTGCCTCCAGATATTTCAAAGGTCCTGAACTTCTTGTTGATCTTCAGGACTATGATTACTCTCTTGATTTATGGAGTCTTGGTTGTATGTTTGCTGGAATGATTTTTCGTAAGGAGCCATTCTTTTACGGACATGATAACTATGATCAACTAGCCAAAATAGTTAAGGTACTTGGAACTGATGAATTAAATGCGTATCTGAACAAGTACCGCATAGAGTTGGACCCAAATCTAGCAGCACTTGTTGGGAGGTATGCTCGAAAGCCATGGTCAAAGTTTATTAGTGTAGAAAACCAACACTTGGCAGTTCCTGAGGCTATTGACTTTGTTGACAAGTTACTGCGGTATGATCACCAAGATCGACCCACTGCAAAAGAAGCCATGGCCCACCCTTACTTCAATCCAGTTAGAAATGCTGAAAGCAGCAGAACTCATACACATTGA 1275 0.4565 MAIRPFQFQSSTFSRDTFLSLFRTYHHLHLPSSSSSSFPTLPSIFLLRSFAASAPSSFSRRNRSHPPPPPPPPPPDTLAQKIGKSTRRPGATSKARIYADINVVRPKEYWDYENLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHSTDNEKCIIKILKPVKKKKIKREIKILQNLCGGPNVIKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLAKIVKVLGTDELNAYLNKYRIELDPNLAALVGRYARKPWSKFISVENQHLAVPEAIDFVDKLLRYDHQDRPTAKEAMAHPYFNPVRNAESSRTHTH 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00572 424 Gene3D Transferase(Phosphotransferase) domain 1 202 410 - -
Aip05g00572 424 MobiDBLite consensus disorder prediction 62 78 - -
Aip05g00572 424 Pfam Protein kinase domain 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00572 424 PANTHER CASEIN KINASE II SUBUNIT ALPHA 76 416 IPR045216 GO:0004674|GO:0006468
Aip05g00572 424 Gene3D Phosphorylase Kinase; domain 1 125 201 - -
Aip05g00572 424 SMART serkin_6 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00572 424 SUPERFAMILY Protein kinase-like (PK-like) 99 414 IPR011009 -
Aip05g00572 424 MobiDBLite consensus disorder prediction 404 424 - -
Aip05g00572 424 ProSitePatterns Protein kinases ATP-binding region signature. 131 154 IPR017441 GO:0005524
Aip05g00572 424 PANTHER BNAA04G13490D PROTEIN 76 416 - -
Aip05g00572 424 MobiDBLite consensus disorder prediction 57 91 - -
Aip05g00572 424 ProSiteProfiles Protein kinase domain profile. 125 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00572 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Aip05g00572 424 CDD STKc_CK2_alpha 106 410 IPR045216 GO:0004674|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00572 Aip-Chr5 6794500 6798875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00572 123 411 Core Cell Cycle Gene Families AT1G76540 30.696 3.67e-41 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Aip05g00572 Pkinase 1.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00572 K03097 - gmx:100776388 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00572 05 6794500 6798875 Aip05g00572 05 6794500 6798875 ECH