Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00567 ATGAAATTCAATTTCAAACCACATCACTCTCTCTTCTTAATTATCATAATCTCACTTTTGTCCATATTATCCCTCGCTAAACCCCTCAATGAATCTCACATTACACGAAGAATCCTCCACCAACCACTTTTCCCCGCCGCTTCAGCGCCACCACCCTCGCCTGCTCAATTGCCACCGCCGGTGGACACTCCACCCACTCCGGACACCAACATTCCATTCTTCCATGAGTATCCGACTGGACCACCACCGGATCAGACGCAATCAGCGCCATCAACACCTTCCAACACCACCATCGCCAACCCGACGGCCACGCAGCCGACCAAGGGGACAAAGAAGGTGGCAATTGCCATCTCCGTCGGAATTGTGACGCTTGGGATGCTCTCGGCGCTGGCGTTCTTCTTGTACAAGCACAGGGCCAAGCACCATGCGGAGACACAGAAGCTCGTCGGTGGAAACTCGCAGAGGAACTTGGATGATTCGAGAGCGCCACCGCCATCGAGCTTTCTCTACATTGGGACCGTGGAGCCCACGCGCACCAACGCGAGTGAGCCAATCAGGTCGCCGTATCACAAACTAAATTCCGTTAAGCGGTCGGATCGGTACCGTCCGAGCCCCGAGCTGCAGCCATTGCCGCCTCTCAGTAAACCTCCCGACGGGAATTTCCCGCCGGCGGTGTCACCGTCTTCGTCGTCCGACGAGGAGAGCCACGACACGGTGTTTCACTCGCCGCAGAACTCGTCGGTTAGAGATGACGACGGGTACTACACGCCAGTTTCGCGACAGAGTTATCTGTCCAACGGTAACCCCGCGGCCGTGGCGCCCACGGTGAGGAAGGAAGCCAATTCTTCGACGCCGACTCCGGTTCCGTTCTCGAAGAGGACTTCACCAAAGTCGCGATTGTCTGGTCCGTCGCCGGATGTAAGACACGTCATCATACCGCCTATGAAGAAGGCTCCGCCGCCACCGGTAAAGGATGAGGAAGAGCATGTGGCTTTGGGACATTCTAGAAAGCCAAAGTTCTCAGCTCCTCCCCCAGCACCGAATTTGACGCATCTTCAGTCAACACTCACAAACACACCCCCGCACGTGATTGGGAACCCACTTAATCATCGGCCACCACCACCACCACCACCTCCTCCTCCTCCACCCCCGCGGAAAACAGGGTCTCCGGGAGTAAGTGTTTCCTCATCTTCTGTATCGAGAAAGCAACAGTCTCGTTCTCCAACTGAAGGGAATCGCGAGGCTTCTATTTCTGGTGTTAGGGTGAGTAAAAGTTCAGAGCAAAATGGAAATGGAAACGGAGACGGTGAGAAAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACCAAATTTAAAAGCTTTGCATTGGGATAAGGTCCGTGCTTCCTCAGATCGTGTTACTGTGTGGGACCAGTTAAAATCCAGTTCCTTCCAATTGAATGAGGACATGATGGAGTCTTTATTTGGCTGTAATGCCACTAACTCTGCCCCTAAAGAACCTCCTAAGAAAACGGTTCTGCCTTCCATTGATCATGAGAACAGGGTGCTTGACCCCAAGAAGTCTCAGAACATAGCTATACTACTCAGGGCACTAAATGTCACCAGGGATGAGGTCTCCGAAGCTCTTTTAGATGGGAATCCTGAAGCTTTGGGTGCTGAGCTATTGGAAACACTAGTAAAGATGGCTCCTACTAAAGAGGAAGAGATAAAACTCAAAAACTACAATGGTGACCTCTCAAAACTTGGGTCAGCGGAAAGGTTTCTTAAAGCTGTGCTTGATATCCCTTTTGCCTTTAAGAGGGTTGAAGCTATGCTATATAGGGCTAACTTTGATTCAGAAGTCAACTATCTCAGGAAGTCTTTTCAAACCCTGGAGGCAGCAAGTGAGGAATTAAGGAACAGCCGGTTATTCCTCAAACTCCTTGAAGCTGTTCTCAGAACAGGAAACAGAATGAATGTCGGCACCAATAGAGGCGATGCCAAAGCTTTCAAACTTGACACACTCTTAAAACTTGTAGATATAAAGGGAACAGATGGAAAGACCACATTGCTTCACTTTGTGGTCCAGGAGATTATTAGATCTGAAGATGGAGGCGGGGAATCCGCGAATGGTAGTGTTCAGAACCAAATGGATTCCAAATTTAATGAGGACGAGTTTAAGAAGCAAGGATTACAAGTTGTGGCTGGGCTGAGTAGAGACCTTAGTAATGTTAAGAAAGCAGCAAGAATGGATTCAGATGTCTTAAGCAGCTATGTTTCGAAGCTCGAAACAGGGCTTGATAAAGTGCGACTGGTATTGAAATATGAGAAGCCAGATACGCAGGGGAATTTCTTCAACTCCACAAAGCAATTTCTGAAATATGCTGAAGAAGAAATCACGAGGATTAAGGCTGATGAGAAGAAGGCCTTGTTCCTTGTGAAAGAAGTAACAGAATACTTCCATGGGGATGCAGCAAAAGAAGAAGCCCACCCTTTCAGAATCTTTATGATTGTAAGAGACTTCCTAAATATTCTGGATTTGGTCTGCAAGGAAGTGGGAAGGATGCATGATAGAATTGTCGGCTCCGCGAGATCATTCCGCATAGCCGCAAGTGCACCATTACCTGTTCTCAACAGGTACAGTGCAAAGCAGGATACAAGCTCGGACGAGGAAAGCTCATCCCTCTAG 2709 0.4795 MKFNFKPHHSLFLIIIISLLSILSLAKPLNESHITRRILHQPLFPAASAPPPSPAQLPPPVDTPPTPDTNIPFFHEYPTGPPPDQTQSAPSTPSNTTIANPTATQPTKGTKKVAIAISVGIVTLGMLSALAFFLYKHRAKHHAETQKLVGGNSQRNLDDSRAPPPSSFLYIGTVEPTRTNASEPIRSPYHKLNSVKRSDRYRPSPELQPLPPLSKPPDGNFPPAVSPSSSSDEESHDTVFHSPQNSSVRDDDGYYTPVSRQSYLSNGNPAAVAPTVRKEANSSTPTPVPFSKRTSPKSRLSGPSPDVRHVIIPPMKKAPPPPVKDEEEHVALGHSRKPKFSAPPPAPNLTHLQSTLTNTPPHVIGNPLNHRPPPPPPPPPPPPPRKTGSPGVSVSSSSVSRKQQSRSPTEGNREASISGVRVSKSSEQNGNGNGDGEKXXXXXXXXXXXXXXXXXXXXXXXXPNLKALHWDKVRASSDRVTVWDQLKSSSFQLNEDMMESLFGCNATNSAPKEPPKKTVLPSIDHENRVLDPKKSQNIAILLRALNVTRDEVSEALLDGNPEALGAELLETLVKMAPTKEEEIKLKNYNGDLSKLGSAERFLKAVLDIPFAFKRVEAMLYRANFDSEVNYLRKSFQTLEAASEELRNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDGGGESANGSVQNQMDSKFNEDEFKKQGLQVVAGLSRDLSNVKKAARMDSDVLSSYVSKLETGLDKVRLVLKYEKPDTQGNFFNSTKQFLKYAEEEITRIKADEKKALFLVKEVTEYFHGDAAKEEAHPFRIFMIVRDFLNILDLVCKEVGRMHDRIVGSARSFRIAASAPLPVLNRYSAKQDTSSDEESSSL 902
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00567 902 MobiDBLite consensus disorder prediction 45 106 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 347 364 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 205 223 - -
Aip05g00567 902 ProSiteProfiles Formin homology-2 (FH2) domain profile. 437 878 IPR015425 -
Aip05g00567 902 MobiDBLite consensus disorder prediction 89 106 - -
Aip05g00567 902 PANTHER FORMIN-LIKE PROTEIN 9 901 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 145 455 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 320 335 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 45 67 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 240 269 - -
Aip05g00567 902 Pfam Formin Homology 2 Domain 463 852 IPR015425 -
Aip05g00567 902 MobiDBLite consensus disorder prediction 147 161 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 366 388 - -
Aip05g00567 902 SMART it6_source 455 867 IPR015425 -
Aip05g00567 902 SUPERFAMILY Formin homology 2 domain (FH2 domain) 374 863 - -
Aip05g00567 902 MobiDBLite consensus disorder prediction 172 187 - -
Aip05g00567 902 Gene3D Formin, FH2 domain 464 875 IPR042201 -
Aip05g00567 902 MobiDBLite consensus disorder prediction 389 433 - -
Aip05g00567 902 PANTHER FORMIN-RELATED 9 901 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Aip05g00567 902 MobiDBLite consensus disorder prediction 277 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00567 Aip-Chr5 6692374 6697178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00567 30 892 FH2 protein (formin) Gene Family AT5G67470 56.169 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00567 - - gmx:100798670 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00567 05 6692374 6697178 Aip01g01105 01 24788624 24793008 PCT