Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00528 ATGTGCATCAGGATTGGGGAGGATATGATTGTTGGAGCAATAGTAGATGAGCTTACAAAGAGGAGGGAGGGGGTTTCCCGACGTGGTGGCTCTTGGGGTCTTCCATTTCTGTGTTTGTGTCCTTTGAATGTGTTCATTGAGTGGATTACGACAAATTGCGTTGCATTTAGAGCAATAGAGAGGATGGGGTCCTGCAGCGGTGTTGTAGAGGGAACGTGCCAGTGGAATGTGAGGAGCAGGGATGATTGGGTTCAACGCAGCGGTGTAGGTTTACAAGAGCAGGAAGCATTATATGACATGGGAATTGAAGCGGAGGAATACTTTGGTGACTATGAAAGTAAGGATGACGGGCGTAACGAAGGGTTCGATTCGGATGAAGGAGTGGGGCCAGATGATGTTCTTCGAATGGAATTTAACAGTCCAGATGAAGCCAAATCCTTTTATAATAACTATAGCCGATTAAAGGGGTTTTCTATGAGGCAAGGGAGGAAGGTAACAAATAGTGCAGGGGATATTGTGCGATACACATTTGTGTGCAATAGGCAAGGGTATCGGGAGAAGAAATGGCTAGAGATGGCTAATCGAAAACGGGAGCACAAGATTGTGACTCGTTGTGGTTGCCTTGCCGAGATGAGGATAAAGAGAAAAGATGGGAGTGGCAAATGGTACGTGTCTCGGTTTGTGGATGAGCATAATCATGAACTCGCATCTGGCAAGTTCGTCGATTACTTGAGGTCGCACAGGCGGCTATCTGAAGTAGAGATTGCACAAATGACTAGCTTGAGGGAGGTTGGTATCAGCATTCCTAAAATATATGAGTCCTTCGCGGCACAGCTTGGGGGCTTTAACCTTGTGACATTCACAAAGCAAGACATGTATAATGAGGTGAGGCGACAAAGAGAAATGCAAAATGGAGATGTAAGCGCTGCAATTCGATACTTGGAAGGTGTTTCCCGTGTAGACAACAGAATATTTTGGAGGTACAAGGTTGGGTCTGAAAACAATCTTTGTGACCTATTTTGGAGTGACGGGCGCAGTCATTTCGACTATTCAATATTCGGAGATGTTCTAGCCTTCGATGCTACTTACGGCCGAAACAAGTACAATTTGCCTGTTGTTGTGTTCTCGGGAGTTAACCACCACAACCAAACATGTGTCTTCGGATGTGCAATGGTCTCGTGTGAAACGCAAGAGTCCTACATCTGGGTTCTGCAGCAGTTTTTGGAATGCATGGAAGGAAAGGCCCCTAAGGCAGTCATCACAGATGGAGATACCTCGATGCGAAATGCTATACGTCATGTATTTCCCGAAACCCATCACAGGCTATGTGCTTGGCATTTGCTTCGTAATGCGACCTCCAATATATGTGACTCACGATTCACCCAGCTATTTAGACACTGCATGCTTGCGGACATGGAGGTTGACGAGTTCGAGGCACAATGGGAGGCGATGCTGGATGAGTGTGGGGTTCGTGAAGTCGAATGGGTGAAGGATTTGTACCGCAAAAAAACTGCATGGGCGACTGCATACATCAGAGGCCGATTTTTTGCCGGCATACGGACAACGTCCCGTTGTGAGTCTCTACATGCCAAGTTAGGCAG 1601 0.4678 MCIRIGEDMIVGAIVDELTKRREGVSRRGGSWGLPFLCLCPLNVFIEWITTNCVAFRAIERMGSCSGVVEGTCQWNVRSRDDWVQRSGVGLQEQEALYDMGIEAEEYFGDYESKDDGRNEGFDSDEGVGPDDVLRMEFNSPDEAKSFYNNYSRLKGFSMRQGRKVTNSAGDIVRYTFVCNRQGYREKKWLEMANRKREHKIVTRCGCLAEMRIKRKDGSGKWYVSRFVDEHNHELASGKFVDYLRSHRRLSEVEIAQMTSLREVGISIPKIYESFAAQLGGFNLVTFTKQDMYNEVRRQREMQNGDVSAAIRYLEGVSRVDNRIFWRYKVGSENNLCDLFWSDGRSHFDYSIFGDVLAFDATYGRNKYNLPVVVFSGVNHHNQTCVFGCAMVSCETQESYIWVLQQFLECMEGKAPKAVITDGDTSMRNAIRHVFPETHHRLCAWHLLRNATSNICDSRFTQLFRHCMLADMEVDEFEAQWEAMLDECGVREVEWVKDLYRKKTAWATAYIRGRFFAGIRTTSRCESLHAKLG 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00528 533 Pfam FAR1 DNA-binding domain 146 236 IPR004330 -
Aip05g00528 533 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 132 532 IPR031052 GO:0006355
Aip05g00528 533 PANTHER OS02G0262500 PROTEIN 132 532 - -
Aip05g00528 533 Pfam MULE transposase domain 356 450 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00528 Aip-Chr5 6237536 6243590 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Aip05g00528 MULE 9.5e-31 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00528 - - aip:107620408 739.184