Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00506 ATGCGTCTCCTTTGCTTTCTTGTGGTCTTGTTACAGCACTACCATCAAACCCTCTCCGCAACCATGTCGGAGAACCGTGCTCTTCTCTCTCTCAGAGCCGCCATCACTGATGCAACCCCTCCCTCTCTCTCTTCCTGGAACGCCACCACCCCATACTGCTCCTGGCTCGCCGTAACCTGCGACCACCGCCGCCACGTCATTGCCCTCGACCTCACTGGCCTCGGCCTCTCTGGTACTCTCTCCGGCGATGTCTCCCACCTCCCCTTCCTCTCCAACCTCTCTCTCGCCGATAACACCTTCTCCGGCCCCATCCCGCCATCCCTCTCGTCACTCTCCGCACTCCGATTCCTCAACCTCTCCAACAACGGCTTCAACGGAACCTTCCCCGACGAACTCTCTCGCCTCAACAACCTTCAAGTTCTCGACCTCTACAACAACAACCTCACCGGACAGCTTCCTCTTGCCGTCACTCAGATGCAGAACCTCCTGCATTTGCACCTAGGTGGCAACTACTTCTTCGGCCAGATCCCACCCGAGTACGGAAGCTGGCACCGTCTCCAGTACCTGGCTGTTTCCGGCAACGAGCTCGCTGGACCTATCCCGCCGGAGATTGGGAACCTCACCAGCCTCCGTGAGCTTTACATTGGCTACTACAACACCTACACCGGCGGCATTCCGCCGGAGATCGGAAACATGTCGGCGCTGGTTAGGTTCGACGCTGCCAACTGTGGATTAACCGGGGAGATTCCACGGGAGATTGGAAAGCTCCAGAACCTCGACACTCTGTTTCTTCAGGTGAATGCGCTTGCAGGTTCACTGACGAGAGAGATTGGGAATTTAAAGAGCTTAAAATCATTGGATTTATCCAACAACGCACTTTCCGGCGAGATTCCGGCGAGTTTTGCGGAGGGTTTGGGAAACAACGGGAAGCTCATCGACGTTGATCTTTCTTCCAACAAGCTGACTGGGACGCTTCCTCCTCACGTGTGTTCCGGTAACCGCCTTCAGACTCTGATAACTCTCGGTAACTTTCTCTTCGGTCCAATCCCTGAATCGCTTGGCAAGTGTGAATCCCTCAATAGGATCCGAATGGGTGACAATTTTCTCAATGGTTCAATCCCAAAGGGTCTCTTCGGCCTTCCGAATATCTCGCAGGTTGAGCTTCAGGACAATCTTCTCACCGGTCAGTTCCCTCAAGCTGATGCTTTCTCTGTGAATCTCGGTCAGATTAGTCTTTCTAACAACCAGCTTTCTGGGCCGTTGCCACCTTCCATTGGGAACTTTTCCGGCATGCAAAAACTCCTCCTTGATGGCAACAAGTTCTCTGGTCCGATCCCACCGCAGATTGGGAGGTTGCAGCAGCTGTCCAAAATTGATATCAGCCACAATCTTCTCTCGGGTCCTATCCCGAAAGAGATTAGCCAATGCAAGTTGTTAACTTTCGTTGATCTTAGCCGAAATGAGCTCTCTGGTGAGATTCCTAACGAGGTCACCGGAATGAGGATACTGAATTACTTGAACCTCTCCAGGAACCATCTTGTTGGTAACATTCCTTCGTCCATATCCACAATGCAGAGCTTGACTTCTGTTGATTTTTCGTATAACAATCTCTCTGGTTTGGTTCCTGGCACCGGCCAATTCAGCTACTTCAACTACACCTCTTTCCTTGGAAACCCTGATCTCTGCGGACCCTATTTGAGTCCTTGCAAGGATGGTTCTGGCAGTGGTGGCCACCAAAGTCATGCTAAAGGCCATCTCTCTTCTTCTTTGAAGCTTATAATTGTGATAGGATTGCTTGTGTTCTCCATTGTTTTTGCAGCAGTGGCAATCTTAAAGGCTAGGTCTTTGAAGAAGGCAAGCGAGGGTCGCTCTTGGAAATTGACTGCATTCCAACGTTTGGACTTCACGGTGGATGATGTTTTGGATTGCTTGAAAGAGGACAACATAATAGGGAAAGGAGGTGCAGGCATTGTGTACAAGGGCGCAATGCCGAACGGGGAGCAGGTTGCTGTGAAGAGGCTTCCAGCTATGAGTAGAGGCTCTTCTCATGATCATGGATTCAATGCGGAGATTCAGACATTGGGGCGGATCCGACACAGGCACATTGTTAGGTTACTAGGTTTCTGTTCTAACCATGAGACCAATCTTTTAGTGTATGAGTACATGCCCAATGGAAGTTTAGGTGAAGTTCTTCATGGGAAGAAAGGGGGGCATTTGCATTGGGACACAAGGTACAAAATTGCTGTGGAGGCTGCAAAGGGTCTTTGCTATCTACACCATGATTGTTCACCTCTCATTGTTCATCGAGATGTGAAATCAAACAACATACTTCTTGATTCTGGTTTTGAAGCTCATGTTGCTGATTTTGGGCTTGCCAAATTCTTGCAAGATTCTGGAGCATCTGAGTGCATGTCCGCAATTGCCGGATCATATGGATACATAGCCCCAGAGTATGCCTACACATTGAAAGTCGATGAGAAGAGCGATGTGTACAGCTTTGGTGTGGTCCTTTTGGAGCTCATAACAGGGAGGAAACCAGTTGGAGAATTCGGAGACGGTGTGGATATTGTGCAGTGGGTGAGGAAAATGACAGACTCTAACAAGGAAGGAGCTCTCAAAGTTCTTGATCCAAGGCTTCCCTCAGTTCCCCTTCATGAGGTGATGCATGTTTTCTATGTAGCAATGCTGTGTGTTGAAGAACAAGCAATAGAGCGTCCAACTATGCGTGAAGTTGTTCAGATTCTCACAGAGGTTCCAAAGCCTCCTGGGTCTAAACAAGGAGACTTAACAATTACAGAGTCATCTTTGTCTTCATCAAAAGCATTAGAGTCTCCAAATGCAGCCTCAAATGATCATGAACATGAACATGAACATGAGCATGAACACCCCCCTCAATCTCCACCAACTGATCTTCTAAGCATTTGA 2925 0.493 MRLLCFLVVLLQHYHQTLSATMSENRALLSLRAAITDATPPSLSSWNATTPYCSWLAVTCDHRRHVIALDLTGLGLSGTLSGDVSHLPFLSNLSLADNTFSGPIPPSLSSLSALRFLNLSNNGFNGTFPDELSRLNNLQVLDLYNNNLTGQLPLAVTQMQNLLHLHLGGNYFFGQIPPEYGSWHRLQYLAVSGNELAGPIPPEIGNLTSLRELYIGYYNTYTGGIPPEIGNMSALVRFDAANCGLTGEIPREIGKLQNLDTLFLQVNALAGSLTREIGNLKSLKSLDLSNNALSGEIPASFAEGLGNNGKLIDVDLSSNKLTGTLPPHVCSGNRLQTLITLGNFLFGPIPESLGKCESLNRIRMGDNFLNGSIPKGLFGLPNISQVELQDNLLTGQFPQADAFSVNLGQISLSNNQLSGPLPPSIGNFSGMQKLLLDGNKFSGPIPPQIGRLQQLSKIDISHNLLSGPIPKEISQCKLLTFVDLSRNELSGEIPNEVTGMRILNYLNLSRNHLVGNIPSSISTMQSLTSVDFSYNNLSGLVPGTGQFSYFNYTSFLGNPDLCGPYLSPCKDGSGSGGHQSHAKGHLSSSLKLIIVIGLLVFSIVFAAVAILKARSLKKASEGRSWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGEQVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSGFEAHVADFGLAKFLQDSGASECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRKMTDSNKEGALKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAIERPTMREVVQILTEVPKPPGSKQGDLTITESSLSSSKALESPNAASNDHEHEHEHEHEHPPQSPPTDLLSI 974
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00506 974 Gene3D Phosphorylase Kinase; domain 1 612 721 - -
Aip05g00506 974 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 303 956 - -
Aip05g00506 974 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 303 - -
Aip05g00506 974 SMART serkin_6 644 914 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00506 974 SUPERFAMILY RNI-like 69 395 - -
Aip05g00506 974 Gene3D Ribonuclease Inhibitor 303 573 IPR032675 -
Aip05g00506 974 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 303 956 - -
Aip05g00506 974 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 303 - -
Aip05g00506 974 Pfam Protein tyrosine and serine/threonine kinase 646 915 IPR001245 GO:0004672|GO:0006468
Aip05g00506 974 Pfam Leucine rich repeat N-terminal domain 25 61 IPR013210 -
Aip05g00506 974 SUPERFAMILY Protein kinase-like (PK-like) 637 915 IPR011009 -
Aip05g00506 974 SMART LRR_typ_2 280 308 IPR003591 -
Aip05g00506 974 SMART LRR_typ_2 524 547 IPR003591 -
Aip05g00506 974 SMART LRR_typ_2 452 476 IPR003591 -
Aip05g00506 974 SMART LRR_typ_2 135 159 IPR003591 -
Aip05g00506 974 SMART LRR_typ_2 111 130 IPR003591 -
Aip05g00506 974 Gene3D Transferase(Phosphotransferase) domain 1 722 929 - -
Aip05g00506 974 Gene3D Ribonuclease Inhibitor 235 302 IPR032675 -
Aip05g00506 974 Gene3D Ribonuclease Inhibitor 176 234 IPR032675 -
Aip05g00506 974 SUPERFAMILY L domain-like 306 569 - -
Aip05g00506 974 MobiDBLite consensus disorder prediction 918 974 - -
Aip05g00506 974 ProSiteProfiles Protein kinase domain profile. 644 918 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00506 974 MobiDBLite consensus disorder prediction 927 946 - -
Aip05g00506 974 ProSitePatterns Serine/Threonine protein kinases active-site signature. 766 778 IPR008271 GO:0004672|GO:0006468
Aip05g00506 974 Gene3D Ribonuclease Inhibitor 21 175 IPR032675 -
Aip05g00506 974 Pfam Leucine Rich Repeat 282 302 IPR001611 GO:0005515
Aip05g00506 974 MobiDBLite consensus disorder prediction 947 965 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00506 Aip-Chr5 5898612 5902321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00506 13 945 Receptor kinase-like Gene Family AT5G65700 75.963 0.0 1483
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Aip05g00506 PK_Tyr_Ser-Thr 4.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00506 - - gmx:548032 1383.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00506 05 5898612 5902321 Aip01g01189 01 29410414 29414684 PCT