Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00500 ATGGCTGCAGAGATTGGGCTTCTCTCAATGAGCCAGATCCAAAAATTGTCACAATCCCAACAACAACAACAACAACAACAAAAACACAAAACCAAAAGCAGCAACAACAACCACCGCCACCACCACCCTCCTCCACCTCCTTCAAACCCTAACTCATCCATCACCACCACTTGGATGTGGAACCCTAGGGAACAGCACCAAGAAGATGACGACTCTTGGGAGGTCAGAGCCTTTGCAGAGGACACTAGGAACATCATGGGAACCACGTGGCCACCGAGGTCCTACACCTGCACCTTCTGCAGGAGGGAGTTCCGCTCCGCCCAAGCCCTCGGCGGCCACATGAACGTCCACCGCCGAGACCGTGCTCGCCTCCACCACCACCAACCTCCTCTTCCTCCTCCACCTCCTCCACCGCCTCCGCCTTTTCCTCATCATCATCTTCATCAATATCCATCACCAGCAGCATTCATAAATGTCCCTCATCGTCATCATCAGGATCTGGTTTCAAATGCTACAGGGTTGTGCGTCTTCTATCATTTGCCACCAAGCCCTAATCGTACCACTACCTTCGCTACTCCATCTCCGTCTCCGTCTCCATCCACTCTTCTCTCCATGACGTCATCCTCATCGTCATCTTATTACCCACAAAACAACTTGATGACGATGATGCAACCGCTTTGTTCTCCCTCCCTTGACTTGCCATCCGGGATCAACGGCGTTTCTTCTTCTTCTCCTTCTTACTCCACCAAAGTGATTGAAGAAGCCCTCGTTAACAACAACAATAACGGCCATCACCACCACCTTGAAGAGCTTGATCTAGAGCTGCGCTTGGGGCAAAAGCGACCACCAACTCGACCAAGCTAA 864 0.5162 MAAEIGLLSMSQIQKLSQSQQQQQQQQKHKTKSSNNNHRHHHPPPPPSNPNSSITTTWMWNPREQHQEDDDSWEVRAFAEDTRNIMGTTWPPRSYTCTFCRREFRSAQALGGHMNVHRRDRARLHHHQPPLPPPPPPPPPPFPHHHLHQYPSPAAFINVPHRHHQDLVSNATGLCVFYHLPPSPNRTTTFATPSPSPSPSTLLSMTSSSSSSYYPQNNLMTMMQPLCSPSLDLPSGINGVSSSSPSYSTKVIEEALVNNNNNGHHHHLEELDLELRLGQKRPPTRPS 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00500 287 MobiDBLite consensus disorder prediction 1 56 - -
Aip05g00500 287 MobiDBLite consensus disorder prediction 10 31 - -
Aip05g00500 287 PANTHER OS07G0101800 PROTEIN 57 281 - -
Aip05g00500 287 SUPERFAMILY beta-beta-alpha zinc fingers 92 122 IPR036236 -
Aip05g00500 287 MobiDBLite consensus disorder prediction 128 145 - -
Aip05g00500 287 SMART c2h2final6 95 117 IPR013087 -
Aip05g00500 287 Pfam C2H2-type zinc finger 95 119 - -
Aip05g00500 287 MobiDBLite consensus disorder prediction 122 145 - -
Aip05g00500 287 MobiDBLite consensus disorder prediction 187 212 - -
Aip05g00500 287 PANTHER OS07G0101800 PROTEIN 57 281 - -
Aip05g00500 287 ProSitePatterns Zinc finger C2H2 type domain signature. 97 117 IPR013087 -
Aip05g00500 287 ProSiteProfiles Zinc finger C2H2 type domain profile. 95 122 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00500 Aip-Chr5 5757777 5759054 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00500 57 128 C2H2 Transcription Factor Family AT4G17810 73.333 1.73e-35 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00500 - - adu:107487554 363.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00500 05 5757777 5759054 Aip05g00500 05 5757777 5759054 ECH