Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00491 ATGGGAGGGGCATCACTGCCTCCGGGTTTTCGTTTCCACCCTACTGATGAAGAACTGATAGGATACTACCTGAAAAGAAAAGTTGAGGAGCTTGAAATTGAACTTGAAGTTATCCCTGTGATTGATTTGTACAAGTTTGATCCTTGGGAGTTGCCGGAGAAGTCATTCTTACCCAAAAGAGACTTGGAATGGTTCTTCTTTTGTCCAAGGGATCGAAAGTATCCGAATGGATCAAGAACAAACAGAGCTACCAAAGCAGGATATTGGAAAGCCACTGGAAAAGACAAAAAGGTTGTGTGCCAATCTAGTCCATCAACATCAATCATGAAAGCCACCGGATATCGCAAGACCCTTGTTTTCTATCGGGGAAGAGCCCCTTTAGGCGACCGAACGGATTGGGTTATGCACGAGTATCGCCTCTGTGATGATCTTGGCCAAGACTCACCAAGTTTTCAGGGTGCTTATGCTTTGTGCCGGGTTATTAAGAAGAATGACAAGGCCAGTGATTACAAGGGTAAAAGAGGTGTCAGCAGTTCCAAGAATGAGAATGAGACCTCAATGAGATTGTCATCCTCTAAGGAGCACTTGAGCATCTCTGCTGATGTTTCTTCTCAAGCAAGTCAGCTATGCAGCGAGAGTCGTTATTCGAGCCCTATAGCTTCTCCTTGTGCATACAATGTGGCTGCAACGGCTGTGTTTGAGCCACCTTCTGTGGACACTAATCCTTCAACCTTCTTGGTCTCCCCTGATATGATTCTTGATTCTTCAAAGGACTTTGCTCAAACACAAGATGCTATTTCAGAATTCCTTCCGCATCATGAATTGCTAAGTACAATGACACCATGGCAATCATTGGAACATACAGAAATTTCATCCAGTTCATCCTACTCAAATTTCAATGGGGAGATAGAATTCTCTGATGAACTTGGCCTAATTGGCCGAATGTCGCGTTACTCAGGACAAGTAGACATGTTAGACTTCTATGGAAATGAGGAAGTGCTGTATGAATATGAAGGATATGACCAGATCAATTCAATCAGAGATCCAAGACAATTCTGA 1059 0.4344 MGGASLPPGFRFHPTDEELIGYYLKRKVEELEIELEVIPVIDLYKFDPWELPEKSFLPKRDLEWFFFCPRDRKYPNGSRTNRATKAGYWKATGKDKKVVCQSSPSTSIMKATGYRKTLVFYRGRAPLGDRTDWVMHEYRLCDDLGQDSPSFQGAYALCRVIKKNDKASDYKGKRGVSSSKNENETSMRLSSSKEHLSISADVSSQASQLCSESRYSSPIASPCAYNVAATAVFEPPSVDTNPSTFLVSPDMILDSSKDFAQTQDAISEFLPHHELLSTMTPWQSLEHTEISSSSSYSNFNGEIEFSDELGLIGRMSRYSGQVDMLDFYGNEEVLYEYEGYDQINSIRDPRQF 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00491 352 Pfam No apical meristem (NAM) protein 7 140 IPR003441 GO:0003677|GO:0006355
Aip05g00491 352 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 352 - -
Aip05g00491 352 MobiDBLite consensus disorder prediction 169 194 - -
Aip05g00491 352 SUPERFAMILY NAC domain 4 163 IPR036093 GO:0003677|GO:0006355
Aip05g00491 352 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 1 352 - -
Aip05g00491 352 Gene3D NAC domain 15 168 IPR036093 GO:0003677|GO:0006355
Aip05g00491 352 ProSiteProfiles NAC domain profile. 6 163 IPR003441 GO:0003677|GO:0006355
Aip05g00491 352 MobiDBLite consensus disorder prediction 179 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00491 Aip-Chr5 5593132 5595535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00491 1 310 NAC Transcription Factor Family AT4G17980 54.167 4.27e-108 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Aip05g00491 NAM 1.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00491 - - adu:107487585 691.034