Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00489 ATGGGAAGAACCTCCTCACTCTGCAACCTCTTCTCTTGCTTCGCACCACCCACCACCAACGACCACCACCAACAACCACCCGAGCTCGCATTCCAAGAAACCGAACCACTAGACGAAACCCTAGGTCACTCATTCTGCTACGTCAGATCCTCAAATCGCTTCGTCTCTTCTCCCACTCACTCACCCTCTCATTCCGATCGCTTCCTCTCTTCCCCTTCCGCCTCCCTCCGCTTCTCCCCAACCCACACCGAACCCGTATTCAAGTCCATTTCCGGTGCCTCCGTTAGCGCCAACAGCTCCGCTCCCAAAACCGTTCTCCAATTTGACGCTGATGCCGCAGCTGGTTTCCCTCCCAGGGGCAGTATCGTAAATGGATTCGAAGCCACGTCGTCGTTTAGCGCACTCCCGCTTCAGCCAGCTCCCAGAGGCAATGGTGAGCCTTCTGGAAGGGCTTTCTTCCTCTCCGGTCCAATCGAGAGCGGAGCTATGTCCGGTCCACTTGACGCCGGCGCCGCCGCGGAAGGGGGAGGACCCGCCTCCGGCGCCGGTGTTCCTTTTTCGGCGCCGCTGGGCGGGTTGTACGCCAAGAAGAAGCGGAAGAAGGGGATCCCCGGGCTTAGGAAGGCGTTCCACCGGAGAAGCCTCTCGGAGATGAAGCGGCCTTGGGTGGTGCCCGTGCTGAACTTCGTCGGGAGGAAGGAAGATCCGCCGGAGACTGAAGGAGGGAGCGGGGCTGCAGCGGCGGAGGTGGGGAAGGGCGAGAGCAATGTGCAGTGGGCGCTGGGGAAGGCAGGGGAGGATCGCGTGCACGTGGTGGTGTCGGAGGAGCAGGGTTGGTTGTTCGTGGGGATCTACGACGGCTTCAACGGCCCCGACGCGCCGGAGTTCTTAATGGGTCACCTCTACCGTGCTGTTCACAGTGAGCTTCAGGGGTTGTTTTGGGAAGTCGAAGAAGAAGAAAAAGCAGTGGAAACTAACCCCTCGAGTGAACCTGCATCTGCACCTGCAGCTGAATCGTCAATGGCTGCTGAAGAAGATTTCAAGGACGATGGAGGGTCAGCAAAGAGAGTGACATTTCAGGTGGAGGGAACGGAGAGCAGGCGGCGCAGGCTGTGGGAGCTTCTTGCGGAGGATGCTGCTGAAGATGGGCTTGATCTTTCGGGTTCGGACAGGTTTGCATTTTCTGTTGATGATGCACTCAGCGTGAGCAAGGAGGGCTCATCAGGTAGTAGAAGGTGGATGGTGTTGTCAAAATTGAAGCATGGATTGTCAAAGCACAAGGAGGGCCGTGGGGGGAAGTTGTTACCTTGGAACTTGGCTACGGAAGATAAGGAGAAGGTTGAGGTGGAAACCCGGGCAGAAGAGAAATCTCATGGTGGGGATGGCACTGGCAATGGCAATGGTGGTGGTAGAAGACGGAAAGTGGGTCCAGTGGATCATGATCTGGTTTTGAGGGCATTGTCTCGGGCACTTGAGATGACAGAACTTGCATATTTGGATATGACGGATAAGGTTATCGATACAAATCCGGAGCTTGCTCTAATGGGGTCTTGCCTTCTAGTTGCTTTGATGAGGGGCGAGGATGTGTATGTGATGAACGTGGGTGATAGCAGGGCCATTGTTGCTCAGTATGAGCCCATAGAAGTTGGTTGTAGCAAAGAATCCGGAAGTCATGGGGATGTTGGGTCAGGTGCAGAGAGCATTACAGAGGAGTCTTCATTAGGCCAAGGTGAACGTGCCATCAGGTCGGGGAAGGAGGGTCCTGCTCAGGAAATGAGGTTGGTGGCATTGCAATTGTCCACTGACCACAGCACGAGTGTTGAAGAGGAAATCATTAGGATCAAGAATGAACATCCTGATGATAGCCACTGTATTGTAAATGATAGAGTGAAAGGCCGTCTTAAGGTCACCAGAGCATTCGGGGCAGGATTTTTGAAACAGCCAAAATTCAATGATGCAGTACTAGAAATGTTTCGAAATGAATATATTGGAACTGCTCCATATGTATCCTGCTGCCCTTCATTACGTCATCATAGATTATGCCCTAGAGATCAGTTCTTGATCCTCTCATCTGATGGGTTATATCAATATCTAAGCAATCAAGAAGTGGTTTCTCAAGTGGAGAGCTTCATGGAAAAGTTTCCTGATGGAGATCCTGCCCAACATTTGATTGAGGAGCTGCTTGTCCGTGCAGCCAAAAAGGCTGGAATGGATTTTCATGAGTTGCTGGATATCCCTCAAGGAGATCGGAGGAAGTACCATGATGATGTTACTGTTATGGTGATATCACTCGAAGGAAGAATCTGGAAGTCATCAGGGAAGTACCCGTGA 2331 0.5294 MGRTSSLCNLFSCFAPPTTNDHHQQPPELAFQETEPLDETLGHSFCYVRSSNRFVSSPTHSPSHSDRFLSSPSASLRFSPTHTEPVFKSISGASVSANSSAPKTVLQFDADAAAGFPPRGSIVNGFEATSSFSALPLQPAPRGNGEPSGRAFFLSGPIESGAMSGPLDAGAAAEGGGPASGAGVPFSAPLGGLYAKKKRKKGIPGLRKAFHRRSLSEMKRPWVVPVLNFVGRKEDPPETEGGSGAAAAEVGKGESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMGHLYRAVHSELQGLFWEVEEEEKAVETNPSSEPASAPAAESSMAAEEDFKDDGGSAKRVTFQVEGTESRRRRLWELLAEDAAEDGLDLSGSDRFAFSVDDALSVSKEGSSGSRRWMVLSKLKHGLSKHKEGRGGKLLPWNLATEDKEKVEVETRAEEKSHGGDGTGNGNGGGRRRKVGPVDHDLVLRALSRALEMTELAYLDMTDKVIDTNPELALMGSCLLVALMRGEDVYVMNVGDSRAIVAQYEPIEVGCSKESGSHGDVGSGAESITEESSLGQGERAIRSGKEGPAQEMRLVALQLSTDHSTSVEEEIIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKFNDAVLEMFRNEYIGTAPYVSCCPSLRHHRLCPRDQFLILSSDGLYQYLSNQEVVSQVESFMEKFPDGDPAQHLIEELLVRAAKKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYP 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00489 776 PANTHER PROTEIN PHOSPHATASE 2C 23 774 IPR015655 GO:0004722|GO:0006470
Aip05g00489 776 SUPERFAMILY PP2C-like 263 765 IPR036457 -
Aip05g00489 776 Pfam Protein phosphatase 2C 488 547 IPR001932 -
Aip05g00489 776 Pfam Protein phosphatase 2C 598 729 IPR001932 -
Aip05g00489 776 PANTHER PROTEIN PHOSPHATASE 2C 29 23 774 - -
Aip05g00489 776 MobiDBLite consensus disorder prediction 448 476 - -
Aip05g00489 776 MobiDBLite consensus disorder prediction 342 360 - -
Aip05g00489 776 MobiDBLite consensus disorder prediction 553 587 - -
Aip05g00489 776 SMART PP2C_4 250 762 IPR001932 -
Aip05g00489 776 CDD PP2Cc 479 764 IPR001932 -
Aip05g00489 776 ProSiteProfiles PPM-type phosphatase domain profile. 249 764 IPR001932 -
Aip05g00489 776 Gene3D - 243 771 IPR036457 -
Aip05g00489 776 MobiDBLite consensus disorder prediction 318 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00489 Aip-Chr5 5578800 5583857 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00489 35 775 PP2C-type Phosphatase Gene Family AT2G35350 58.228 0.0 784
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00489 - - gmx:100775371 1012.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00489 05 5578800 5583857 Aip01g01230 01 33576590 33582159 PCT