Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00486 ATGGATCCTGAAACTTATCCCAATCCAATGGAACTTAATCCTTTCAGATGGGATAATTACCGTCCTAGAGCAGGGTCTTTTCTTCCGTTCGGATTAGGAAGTCGGTTATGTCCTGGAGGTGACCTAGCCAAGCTTGAGATCACCATTTTCCTCCATCATTTTCTTCTAAATTACAAAATGGAGAAGGTTAATCATGATTGTCCAGTGATTTACTTACGGGTGCCAAGGTCAAGTGACAACTACCTTGCAAGAATTGTGAAAGCCACGTAA 270 0.4185 MDPETYPNPMELNPFRWDNYRPRAGSFLPFGLGSRLCPGGDLAKLEITIFLHHFLLNYKMEKVNHDCPVIYLRVPRSSDNYLARIVKAT 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00486 89 PANTHER CYTOCHROME P450 26 1 78 - -
Aip05g00486 89 SUPERFAMILY Cytochrome P450 1 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00486 89 PRINTS E-class P450 group I signature 37 60 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00486 89 PRINTS E-class P450 group I signature 27 37 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00486 89 Gene3D Cytochrome P450 1 84 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00486 89 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 30 39 IPR017972 GO:0005506|GO:0016705
Aip05g00486 89 Pfam Cytochrome P450 2 66 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Aip05g00486 89 PANTHER ENT-KAURENOIC ACID OXIDASE 2 1 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00486 Aip-Chr5 5546784 5547294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00486 1 88 Cytochrome P450 AT2G32440 61.364 9.36e-35 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00486 K04123 - aip:107632295 184.496