Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip05g00454 ATGATGTGTTTATTCTTCAAACGAAAATCCAAATCCGAGCCACAGCTGCAAAAAACAATCAGGAACAGCAAGGTCAAGTCCACCAACTCGCGATCGTTATCGCCATCGCCAAGGAGTGTTAATGAATTGTATAAGGAGAACCAGCACAATTTCAGGGTCTTCACTCTCAGGGAGCTCGTAGATGCAACCAATGGTTTCAATAGAACGCTCAAGATCGGTGAAGGTGGTTTCGGAAGTGTTTATAGAGGAACCATTCTACCTCTACATCGACATGCTGATCCAATTCTCGTTGCTATCAAAAAGCTCAACACTCGTGGCTTTCAGGGGCACAAAGAATGGCTTGCTGAAGTTCAATTTCTCGGCATCGTTAACCACCCCAATTTGGTTAAGTTATTGGGATATTGCTCTGTAGACACCGAGAGAGGAATTCAAAGGCTATTGGTGTATGAATTCATGCCAAATAGGAGCCTAGAGGATCATCTTTTCAACCATTCTTTACCTCACTTGCCTTGGAAAACTAGATTGCAGATCATGCTTGGTGCTGCTGAAGGATTGGATTACTTACATGAGGGATTGGAAGTTCAGGTGATCTACAGAGATTTCAAATCTTCAAATGTGCTGTTGGACAAAAGTTTCCATCCCAAGCTCTCGGATTTCGGTCTAGCTAGGGAGGGCCCAACCGGTGATCAGACTCATGTATCTACTGCAGTAGTTGGAACACAGGGATATGCAGCGCCGGAGTATGTTGGAACAGGACATCTCAAAGCTAAGAGTGACATATGGAGTTTCGGCGTGGTGCTCTATGAGATTCTCACAGGCAGGAGGGTTCTGGAAAGAGATCGTCCCACAGGAGAACAGAAGCTTCTAGAGTGGGTCAAGAAGTACCCTGCTGATACTAGCAGATTCAGCACCATAATAGACCCTCGCCTCAGGAACCAATACTCCCTTGTTTCGGCTCGAAAGATCGCCAAGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGAGATAGTGGAAAGCTTGAAGCAAGCATTGCAGCTTTCAGAAACCTCAAACAATTTTCAAAAAGGTTAA 1101 0.426 MMCLFFKRKSKSEPQLQKTIRNSKVKSTNSRSLSPSPRSVNELYKENQHNFRVFTLRELVDATNGFNRTLKIGEGGFGSVYRGTILPLHRHADPILVAIKKLNTRGFQGHKEWLAEVQFLGIVNHPNLVKLLGYCSVDTERGIQRLLVYEFMPNRSLEDHLFNHSLPHLPWKTRLQIMLGAAEGLDYLHEGLEVQVIYRDFKSSNVLLDKSFHPKLSDFGLAREGPTGDQTHVSTAVVGTQGYAAPEYVGTGHLKAKSDIWSFGVVLYEILTGRRVLERDRPTGEQKLLEWVKKYPADTSRFSTIIDPRLRNQYSLVSARKIAKXXXXXXXXXXXXXXXXXXXSEIVESLKQALQLSETSNNFQKG 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip05g00454 366 Gene3D Transferase(Phosphotransferase) domain 1 152 357 - -
Aip05g00454 366 ProSiteProfiles Protein kinase domain profile. 66 366 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00454 366 Coils Coil 344 345 - -
Aip05g00454 366 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Aip05g00454 366 SUPERFAMILY Protein kinase-like (PK-like) 47 316 IPR011009 -
Aip05g00454 366 Gene3D Phosphorylase Kinase; domain 1 38 151 - -
Aip05g00454 366 PANTHER RECEPTOR-LIKE KINASE PLANT 24 359 - -
Aip05g00454 366 ProSitePatterns Protein kinases ATP-binding region signature. 72 101 IPR017441 GO:0005524
Aip05g00454 366 Pfam Protein kinase domain 68 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip05g00454 366 PANTHER OS01G0588500 PROTEIN-RELATED 24 359 - -
Aip05g00454 366 Coils Coil 322 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip05g00454 Aip-Chr5 5088845 5091183 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip05g00454 3 314 Glycoside Hydrolase AT3G07070 44.753 6.86e-89 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Aip05g00454 Pkinase 7.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aip05g00454 - K00924 adu:107487526 664.455
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip05g00454 05 5088845 5091183 Aip05g00454 05 5088845 5091183 ECH
Aip05g00454 05 5088845 5091183 Aip01g01288 01 36778621 36781758 PCT